| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1105 |
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| Symbol | |
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| ID | 5746660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1223846 |
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| End bp | 1225744 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641296185 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001562135 |
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| Protein GI | 160896553 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.097468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGGCA AGCCCTCGCT TTCGACCAAG CTGCTGCTCA TGGGCGCGGC CTGCCTGCTC
GCGGCCGTGG CATCGATCGG TTTCACGCTG TGGGTGGCCT GGCAGCTGGA AGGCGGTGCG
GCGGCGGTGA ACGAGGCCGG GCGGCTGCGC ATGAGCATGG TGCGCATGGC CATGGCGCGC
CAGAACGAGG CGCCAGCGCA GTGGCAGGAG CGCGCACGGC AGTTCGACGC CAGCCTGGAC
CTGCTGCGCA GCGGCGACAT GTCGCGCCCG CTGTTCGTGC CCTGGAGCGA TGCGGTCAGC
GCGCGCTACG AGCGCATACG CGGCGACTGG AGTGCGCTGC GCACGCAGTG GCAGGCCGAG
GACCATGTCG ATGCGCAGGC CATCATGGGC AGCGCCGATG CCTTCGTGCG CGAGGTGGAC
GGCTTTGTCG AGGCCATCGA GGACCGGCTC TCGCGCTGGA CGGCCATCCT GCACCTGTTT
CAGATGTGTC TGATGGCGCT GGCCATCATC GCGGCCGTGA GTTTCATGGC CACCAGCTAC
TGGCTGGTGC TGCATCCCGT GGGCCAGCTG CGCTCGGCGC TGGAGCGCAT GCGCCGCGGA
CACCTGGACA CGCGCATGAG CGTGGAGGTG GACGACGAGT TCGGCCAGCT GGCCGCAGGC
TTCAACCTCA TGGCCCAGTC GCTGCAAAGC TCGCACGCCG AGCTGGAGGA CAAGGTGCGC
GAGAAGACCG CCAGCCTCAA CGTGCAGCAC CAGCAGCTGC AGGCGCTGTA CGCGGTCAGC
GTGCAGGCGT CGGAGGCCGC CAGCCTGCAG TCCCTGGCCG AAGGCTTTGT GCGCCAGGTC
CGCCTGGCGG CCCAGGCCGA TGCGGCCACG GTGCGCTGGT CCGACGAGGC CAACGAGCGC
TATGTGCTGC TGGCCGGCGA CGGCCTGCCC CAGTCCATGT CGGTGCAGGA GCACTGCCTG
CACACGGGCG CCTGCCTGTG CGGCCAGCCG CGCGAGCAGG CGCGGCTGCG CGTGATCCCC
ATCACGCCGG CCAGCGACCT GCAGCTGCCC CACTGCCGCG AGGCCGGCTT CGAGACCGTG
GTCAGCATCC CCGTGCAACT GCAGCAACGC CTGCTGGGCG AGGTCAACCT GTTCTTTCGC
TCCACCGTGG TGCTCACGGA CGACATGCGC GACCTGCTGT CCGCCATGGC GCGCCACCTG
GCCAGCGCCA TGGAAAGCCT GCGCGCCACG GCGCTGGAGC GCGAGGCCGC CGTGGCCGAG
GAGCGCGGCC TGATCGCGCG CGAGCTGCAT GACTCCATTG CCCAGTCGCT GGCCTTTCTC
AAGATACAGA CCCAGCTGCT GCGCGACGCC GTGGCCAAGG GCCGCGACGA GGCGCGCGAC
CGCAGCCTGG GCGAGCTGGA AGTGGGCGTG CGCGAATGCT ATGCCGACGT GCGCGAGCTG
CTGGTGCATT TCCGCACGCG CACCAGCGCC GAGGACATCG AGGCCGCGCT GCGCGCCACG
CTGTCCAAGT TCGAGCACCA GACGGGCATC GCCACCTCGC TGAGCATGAC GGGCCAGGGC
CTGCCGCTGG CGCCCGACGT GCAGATCCAG GTGCTGCACA TGGTGCAGGA GGCGCTGTCC
AACGTGCGCA AGCACGCGGG TGCCAGGCAT GTGGAGCTGC GCGTGGGACG CCACCCCTGG
CGCTTCGAAG TCTGCGACGA CGGCTGCGGC TTCGTCCCCG CCGCCGTTGC GCCGGACTCG
CTGCATGTGG GCCTGGGCAT CATGCGCGAG CGCGCCCTGC TGGCGCAGGC GCTGGTCCAT
GTCCACTCCC GCCCCGGCGA GGGCACGCGC GTGCTCATCG AGCTGCCGCC GTCGGCCTCG
GCCGGCGCGC CAGCGCAGGC CCTCCCCTCG AACGCGTGA
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| Protein sequence | MHGKPSLSTK LLLMGAACLL AAVASIGFTL WVAWQLEGGA AAVNEAGRLR MSMVRMAMAR
QNEAPAQWQE RARQFDASLD LLRSGDMSRP LFVPWSDAVS ARYERIRGDW SALRTQWQAE
DHVDAQAIMG SADAFVREVD GFVEAIEDRL SRWTAILHLF QMCLMALAII AAVSFMATSY
WLVLHPVGQL RSALERMRRG HLDTRMSVEV DDEFGQLAAG FNLMAQSLQS SHAELEDKVR
EKTASLNVQH QQLQALYAVS VQASEAASLQ SLAEGFVRQV RLAAQADAAT VRWSDEANER
YVLLAGDGLP QSMSVQEHCL HTGACLCGQP REQARLRVIP ITPASDLQLP HCREAGFETV
VSIPVQLQQR LLGEVNLFFR STVVLTDDMR DLLSAMARHL ASAMESLRAT ALEREAAVAE
ERGLIARELH DSIAQSLAFL KIQTQLLRDA VAKGRDEARD RSLGELEVGV RECYADVREL
LVHFRTRTSA EDIEAALRAT LSKFEHQTGI ATSLSMTGQG LPLAPDVQIQ VLHMVQEALS
NVRKHAGARH VELRVGRHPW RFEVCDDGCG FVPAAVAPDS LHVGLGIMRE RALLAQALVH
VHSRPGEGTR VLIELPPSAS AGAPAQALPS NA
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