Gene Daci_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1102 
Symbol 
ID5746657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1221074 
End bp1222402 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content70% 
IMG OID641296182 
Producthypothetical protein 
Protein accessionYP_001562132 
Protein GI160896550 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGG CGGACGGGCG TCGTATGCTG CGCTCCATGC TGTCGCCAGA GCAACGTCAA 
ACACTGAAGT CGGCCAAGCG CCTGCCGCTG GCGCTGCTGC TGTTCGTGGC GCTGGGCTTC
GTGGCTTCGT CCGTGGCGGC GGGGCACTGG CAGCAGGTGC CGCTGTGGCT GGCCTGCATC
AAGGCCGTGA CCGAGGCCTC GCTGGTCGGC GCGCTGGCCG ACTGGTTTGC GGTGTCGGCG
CTGTTCCGGC GCATTCCGCT GCCCCTGGTC GGGCGCCATA CGGCCATCAT CCCGCGCAAC
AAGGACCGCA TCGGCGAGAA CCTGGCGAAT TTCGTGCGCG ACAAGTTCCT GGACGGGCCT
TCGCTGGTGG CGCTGATCGA GCGCCATGAT CCCGCCCGCG TGCTGGCCGG CTGGCTGACC
ACGCCGGCCA ACAGCACCCT GCTGGGGCGG CAGGTGGCGC GGCTGGCGCT GGCGGCGCTG
GAGATGGTGC AGGACCGGCA GGTGGAGCGC TTTCTGACAC AGGCATTCAA GGCCTTGCTG
GCCCAGGTGG ACCTGCCCCG CGCGGCGGCG GATCTGTTGT CGGGCCTGAC CAGGGACGGC
CGCCACCAGG CCGTGCTGGA CGATGTGCTG GCCCGCGTCA GCGGCGTGCT GCGCGAGGCC
GAGACCCATG TGCTGATCGC CCAGACCATC GTGCTGTGGC TCAAGCGCGA GCATCCGCTC
AAGGAAAAGA TGCTGCCCAC GGACTGGCTC AGCGACAAGG GCGCCAGCGC CATTGCGGGC
GCGCTCGACA GCCTGCTGCA GGACATTGCC AGCAATCCCG AGCACCACAT GCGCAAGGCC
TTCGACGCCT CCGTGGACCG GCTGGTCACG CGGCTGCAGT CCGACCCCGC CATGTCCGAG
CGCGCCGAGC GGCTGCGCCA CTACCTGCTG CACGACGAAA AGCTGGCCGG CTACCTGCGG
GCGCTGTGGC TGGGCCTGCG CGCCAAGCTG CAGGCGGACC TGGCCAACGA GCATTCGCAG
GTGGCGCGCA AGACCGCCGC CATGGGCCGC TGGCTGGGCC AGTCGCTGGC GCACGACGAG
GCGCTGCGCA GTTCCATGAA CGAGCGCCTC AAGCGCTGGG CCCAGGCGCT GGCGCCCGAT
GTCTCGCAGT TCCTGGCCCA GCACATCGCC GATACCGTGC GGCGCTGGGA TGCGCGCGAG
CTGTCCGAGC TGATCGAGCT GCACATCGGC AAGGACCTGC AGTACATCCG CATCAACGGC
ACCGTGGTCG GCGGTGCCGT GGGGCTGGTG CTGTTCCTGG TCTCCAATGC GGGGCGGCTG
TGTGCCTGA
 
Protein sequence
MRMADGRRML RSMLSPEQRQ TLKSAKRLPL ALLLFVALGF VASSVAAGHW QQVPLWLACI 
KAVTEASLVG ALADWFAVSA LFRRIPLPLV GRHTAIIPRN KDRIGENLAN FVRDKFLDGP
SLVALIERHD PARVLAGWLT TPANSTLLGR QVARLALAAL EMVQDRQVER FLTQAFKALL
AQVDLPRAAA DLLSGLTRDG RHQAVLDDVL ARVSGVLREA ETHVLIAQTI VLWLKREHPL
KEKMLPTDWL SDKGASAIAG ALDSLLQDIA SNPEHHMRKA FDASVDRLVT RLQSDPAMSE
RAERLRHYLL HDEKLAGYLR ALWLGLRAKL QADLANEHSQ VARKTAAMGR WLGQSLAHDE
ALRSSMNERL KRWAQALAPD VSQFLAQHIA DTVRRWDARE LSELIELHIG KDLQYIRING
TVVGGAVGLV LFLVSNAGRL CA