| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1094 |
|---|
| Symbol | |
|---|
| ID | 5746649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1211326 |
|---|
| End bp | 1211763 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296174 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001562124 |
|---|
| Protein GI | 160896542 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TTGGAATCTC CACCGCCCCG GACCTGGAGG CCGCCGCGCT GGCGCGCGGC
TACTTCGGCA TCGACGTGCC CTTCATGTCC CATATCGGCC TGGAGCCCGT GAGCCTGGCA
CCCGGCCTGG CGCGCACGCG GCTGCCCATG CGTCCGCACC TGGCCAACAG CCGGGGGCAT
GGCCATGGCG GCGCGCTGAT GAGTGCGCTG GACTTCACGC TGAGCGCGGC CGCGCGCTCG
TCCAACCCGC TGGGGCTGGG CGTGGTGACC ATCGAGATGA GCACGCATTT CCTCGCCTCG
GCCACCACCG ACCTGCTGAT CGAGGCGCGC GTGCTGCGCG CAGGCGCGCG CACCGTGTTC
TGCGAGGGCA ATGTGCTGGA CAGCGCGGGC CAGGCCGTGT GCACGGCGCG GGCCGTGTTC
AAGCTGATCG CGCTGTAG
|
|---|
| Protein sequence | MNAVGISTAP DLEAAALARG YFGIDVPFMS HIGLEPVSLA PGLARTRLPM RPHLANSRGH
GHGGALMSAL DFTLSAAARS SNPLGLGVVT IEMSTHFLAS ATTDLLIEAR VLRAGARTVF
CEGNVLDSAG QAVCTARAVF KLIAL
|
|---|
| |