| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1089 |
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| Symbol | |
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| ID | 5746644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1206702 |
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| End bp | 1208036 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641296169 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001562119 |
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| Protein GI | 160896537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCC CTTCGTCCTT TCCGTCGAGG ACGGCTTCCC ACGCACCATG GAGCGCCTGG
CCCGGGCCGC GTGCCCTGCT GGTGATGGCC GTGCTGACCG CTTGCGGCGC CGTGCAGGCG
GGCGAGCCTG CCGATGCGGC TGCGCCATCT GCAGCCGCTG TTTCCGAGTC CACACCGGCC
GGCCCGCCGC TGGATCTGCA GCAGGCCCTG GCCCTGGCGC TGGACGGCAA CCCCGGCCTG
CGTGCGGCCC GCCGTGCGCT GGAGGCCAGC GATGGCGCCG TGCTCCAAAG CCGTGCCCGG
CCCAACCCCG AGCTGGCCTG GTCGCAGGAG GACACGCGCC GCAGCACCCG CACACTGACC
GTGCAGCTGA ACCAGACCCT GGAAGTGGGC GGCAAGCGCG AGGCCCGCAT GCGCGTGGCC
GAGCGCGGGC GCGACCTGGC GCAGGCCGAG CTGGCGAGGG CCGAGGCTGC GCTGCGCGCC
GACGTGGGCA CGGCCTTCTT CGGCGTGCTG GCTGCGCAGC AGCGCGTGGT CCTGGCCGGG
CAGACGCTGG AGATCGCCAG CAGCGCGCGC GAGGCCGCAG CCCGGCGCGT GGCGGCCGGC
AAGGTGGCGC CGCTGGAGGA AACCCGGGCC CGCGTGGCCG AATCCGGCGC CCGCCTGGAG
CAGGCCCAGG CCCGCTCGGG CCTGCGCGTG GCGCGCGGCC AGCTGCAGGC GCTGTGGGGC
GAGCGAGTGC GCCCCTTCGG CCAGGCCGAG GGCGCGGTGG ACGCCCTGCC CCAGCTGCCT
GAGCTGGCAG CCCTGCAGCA GCGCATCGAA CAGGCTCCCG CCGTGCTGCG TGCGCGCCAG
GCGCTGGAGC AAAGCCGCGC CACGGCCGAC CTGGAGCGTG CGCGGCGCCT GCCCGATCCC
ACCGTCAGCC TGGGCGTCAA GCGCGCCACC GAAGTCGGGC GCAACCAGCT CGTGGTCGGC
GTCTCCGTGC CCCTGCCCGT GCTCGACAGC AACCGGGGCA ACCAGCTGCA GGCCCTGCGC
CTGGCCGATC AGGCCGAGGA GCAGTTGCTG GCCACGCGCG TTCAGCTGCA GGCCCAGCTG
TTCGAGGCGC GCGAGCTGCT GCAGGCCAGC CGCGAGCAGG CGCGCCAGCT GGCCGAGGAG
GTGCTGCCCA CGGCGCGCAC GGCCTACGAG CTGGCCTCGC GCGGGTTTGC GCTGGGCAAG
TTCGGCTACC TCGACGTGCT GGACGCACAA CGCACCTGGT CCGAGGCGCG CAGCCAGTAC
CTGGACCAGC TGCTGGCCAC CCACCGCGCC GCCGCCGACA TCGACCGCCT GCTGGGCACC
GAATCCGGCC TCTGA
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| Protein sequence | MSFPSSFPSR TASHAPWSAW PGPRALLVMA VLTACGAVQA GEPADAAAPS AAAVSESTPA
GPPLDLQQAL ALALDGNPGL RAARRALEAS DGAVLQSRAR PNPELAWSQE DTRRSTRTLT
VQLNQTLEVG GKREARMRVA ERGRDLAQAE LARAEAALRA DVGTAFFGVL AAQQRVVLAG
QTLEIASSAR EAAARRVAAG KVAPLEETRA RVAESGARLE QAQARSGLRV ARGQLQALWG
ERVRPFGQAE GAVDALPQLP ELAALQQRIE QAPAVLRARQ ALEQSRATAD LERARRLPDP
TVSLGVKRAT EVGRNQLVVG VSVPLPVLDS NRGNQLQALR LADQAEEQLL ATRVQLQAQL
FEARELLQAS REQARQLAEE VLPTARTAYE LASRGFALGK FGYLDVLDAQ RTWSEARSQY
LDQLLATHRA AADIDRLLGT ESGL
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