Gene Daci_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1079 
Symbol 
ID5746634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1193052 
End bp1194278 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID641296159 
Productnitric oxide dioxygenase 
Protein accessionYP_001562109 
Protein GI160896527 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCA TCGCACCGGG CATGCCCGTC CCCGTACCCA AGGAGTTTCC CGTGCTGACC 
GACCGCCAAC GTGCCATCGT CCAATCCACC GTCCCGCTGC TTGAAACCGG CGGCGAGGCT
TTGATCACCC ACTTCTACCA GACCATGCTG GGCGAGTACC CCGAGGTGCG CGCCCTGTTC
AGCATGGCCC ACCAGCAAAG CGGTGCCCAG CCGCGTGCCC TGGCCTATAG CGTGCTCATG
TACGCCAAGC ACATCGACCG GCTCGAAGCC CTGGGCGATC TGCCCGCGCA GATCATCAAC
AAGCACGTTG CGCTGCAGGT GCAGCCCGAG CACTACCCCA TCGTCGGCAC CTGCCTGCTG
CGCGCCATCC GCGAAGTGCT GGGCGCCGAG ATCGCCACCG ACGAGGTCAT CGATGCCTGG
GGCGCCGCCT ACCAGCAGCT GGCCGACATC CTGATCGGCG CCGAACGCCA GGCCTATGAC
CGCACGGCGG CGGCCGAGGG CGGCTGGCGC GGCGAGCGCG CCTTCGTGGT CGAGGACAAG
GTGGCGGAAA GCGCCGAGAT CACCTCGTTC TACCTGGTGC CGGCCGATGG CGGCCCCGTG
ATCGCCCACC AGCCCGGCCA GTACATCGGC CTGCGCCTGG TGGTGGACGG GCAGGAGCAG
CGGCGCAACT ACTCGCTGTC CGCGCCCGCC GATGGCCGCA GCCTGCGCAT CAGCGTCAAG
CGCGAGGCAG GTGGCAAGGT CTCCAACTTC CTGCACGACC GGGTCCGCGT CGGCGACACG
CTGCAGCTGT TCCCGCCCGC AGGCCACTTC ACGCTGCAGC CCGGCGAGCG TCCGCTGGTG
CTGATCAGCG GGGGCGTGGG CATCACGCCG ACCCTGCCCA TGCTGGATGC GGCCTTGCCC
AGCAAGCGTC CCGTGGTCTT CATCCACTGC GCGCGTGAGC GCGGTGTTCA TGCCTTCCGT
GAACGTGTGG ATGCGCTGGC CGCAGTGCAT CCGCAGCTCA GCCGGTACTA CTGCTATGAC
CGGGTGGATG AGGGCGATGA GGCCGATGCG CAGGGGCTGC TGACCGCCCG GCAGTTGGGT
GAGTGGCTGC CTTCAGTGGA TGCCGATGTG TATTTCCTGG GGCCCCGGCC GTTCATGCGG
TCGGTGAAGG AGTCGTTGCG TGTGCTGGGG GTGCCGGAAG GGCAGGTCCG CTATGAATTC
TTTGGGCCGG CGGAGGCGTT GGCCTGA
 
Protein sequence
MPGIAPGMPV PVPKEFPVLT DRQRAIVQST VPLLETGGEA LITHFYQTML GEYPEVRALF 
SMAHQQSGAQ PRALAYSVLM YAKHIDRLEA LGDLPAQIIN KHVALQVQPE HYPIVGTCLL
RAIREVLGAE IATDEVIDAW GAAYQQLADI LIGAERQAYD RTAAAEGGWR GERAFVVEDK
VAESAEITSF YLVPADGGPV IAHQPGQYIG LRLVVDGQEQ RRNYSLSAPA DGRSLRISVK
REAGGKVSNF LHDRVRVGDT LQLFPPAGHF TLQPGERPLV LISGGVGITP TLPMLDAALP
SKRPVVFIHC ARERGVHAFR ERVDALAAVH PQLSRYYCYD RVDEGDEADA QGLLTARQLG
EWLPSVDADV YFLGPRPFMR SVKESLRVLG VPEGQVRYEF FGPAEALA