Gene Daci_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1071 
Symbol 
ID5746626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1181425 
End bp1182147 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID641296151 
ProductTetR family transcriptional regulator 
Protein accessionYP_001562101 
Protein GI160896519 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.457023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC CCCCTGTCAC CCCGCGCGGC CGCCAGCGCC TTCCCACGGC CGGCTCCGAT 
GAAAAGCGCG AACGCATCCT CAAGGCGGCC GAGGCCCTGT TCGACCGCAA CGGCTACGCC
AACACCACGA TGGAGCAGAT CGTCCAGGCC CTGGGCGTGA CCAAGCCCTT CGTCTACTAC
TACTTCCGCA ACAAGCAGGA GATCTTCGAG ACCCTGTGCT GGGCGCCCAC CGAGGCCTGC
TTCACGGTGC TGGACTTCGC GGCCGACGAT GCGCGCGCCG CGCACGAGAA GGCCGTGGAC
GGCCTGCAGC GCCTGATCGC GGCCACCATT GCCCACTATC CGGCGGCCTT CTTTCCCTAC
CGCGAGCCCC AGGCCTTCAG CCCCGCGTAC ATGAAAGCCT CGCGCACGCT GGCGCGCCGT
TTCTACCGCC AGTTCTGCGC GCTGCTCGAA GAAGGCCGCG CCAGCGGCCA TCTGGATTTC
CGCGAGACGC GCATCACCGC CCAGGCCGCC TGCAGCCTGC CGGGCTTTCT CTACAACTGG
TACCGCCCCG GCGGCCGCCT GGGCACGGCC GAGATGGTGG CCGAGCTGAC CGAGCTGGCC
AGCCGCGTGC TGGGCCTGCG CACGGCGCCT GCCACCGCGC CCGAAGCCAT TGCCACATCC
CCCGCGAAAA AGACGCCTGC ACGGCGCAGC CGGCCCCGCG CCGAGCCGCC CGGCAAGGAC
TGA
 
Protein sequence
MPKPPVTPRG RQRLPTAGSD EKRERILKAA EALFDRNGYA NTTMEQIVQA LGVTKPFVYY 
YFRNKQEIFE TLCWAPTEAC FTVLDFAADD ARAAHEKAVD GLQRLIAATI AHYPAAFFPY
REPQAFSPAY MKASRTLARR FYRQFCALLE EGRASGHLDF RETRITAQAA CSLPGFLYNW
YRPGGRLGTA EMVAELTELA SRVLGLRTAP ATAPEAIATS PAKKTPARRS RPRAEPPGKD