Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1071 |
Symbol | |
ID | 5746626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1181425 |
End bp | 1182147 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641296151 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001562101 |
Protein GI | 160896519 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.457023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGC CCCCTGTCAC CCCGCGCGGC CGCCAGCGCC TTCCCACGGC CGGCTCCGAT GAAAAGCGCG AACGCATCCT CAAGGCGGCC GAGGCCCTGT TCGACCGCAA CGGCTACGCC AACACCACGA TGGAGCAGAT CGTCCAGGCC CTGGGCGTGA CCAAGCCCTT CGTCTACTAC TACTTCCGCA ACAAGCAGGA GATCTTCGAG ACCCTGTGCT GGGCGCCCAC CGAGGCCTGC TTCACGGTGC TGGACTTCGC GGCCGACGAT GCGCGCGCCG CGCACGAGAA GGCCGTGGAC GGCCTGCAGC GCCTGATCGC GGCCACCATT GCCCACTATC CGGCGGCCTT CTTTCCCTAC CGCGAGCCCC AGGCCTTCAG CCCCGCGTAC ATGAAAGCCT CGCGCACGCT GGCGCGCCGT TTCTACCGCC AGTTCTGCGC GCTGCTCGAA GAAGGCCGCG CCAGCGGCCA TCTGGATTTC CGCGAGACGC GCATCACCGC CCAGGCCGCC TGCAGCCTGC CGGGCTTTCT CTACAACTGG TACCGCCCCG GCGGCCGCCT GGGCACGGCC GAGATGGTGG CCGAGCTGAC CGAGCTGGCC AGCCGCGTGC TGGGCCTGCG CACGGCGCCT GCCACCGCGC CCGAAGCCAT TGCCACATCC CCCGCGAAAA AGACGCCTGC ACGGCGCAGC CGGCCCCGCG CCGAGCCGCC CGGCAAGGAC TGA
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Protein sequence | MPKPPVTPRG RQRLPTAGSD EKRERILKAA EALFDRNGYA NTTMEQIVQA LGVTKPFVYY YFRNKQEIFE TLCWAPTEAC FTVLDFAADD ARAAHEKAVD GLQRLIAATI AHYPAAFFPY REPQAFSPAY MKASRTLARR FYRQFCALLE EGRASGHLDF RETRITAQAA CSLPGFLYNW YRPGGRLGTA EMVAELTELA SRVLGLRTAP ATAPEAIATS PAKKTPARRS RPRAEPPGKD
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