| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1070 |
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| Symbol | |
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| ID | 5746625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1180115 |
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| End bp | 1181398 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296150 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001562100 |
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| Protein GI | 160896518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.392938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCC GCCGCCATTG CATCCGACGA TATTCCCAAC CATCCATCGT TCTCGCCACC
GCCCTGCTGT GCGCCACGGC CGCCCACGCC CAGGGCGGCG AGACCTTCAA GATCGCCTTC
ATCGATCCGC TGTCCGGCCC CTTCGTCAGC ACGGGCGAGC TGATGCGCGA CCACGTGCAA
TACGCGGTCG AGGACGTGAA CGCCAAGGGC GGGCTGTTCA ACGGCGCGAA GCTGCAGCTG
CTGCAGTTCG ACAGCAAGCT CTCGGCCCAG GAAAGCCAGG CCGCGTTGCA GGCGGCCATT
GACCAGGGCG CGCGCGTGGT GGTGACGGGA GGTTCGGGCT CTTCGGTGGT GGCGGCGCTG
GTGCAGGCGG CATCGCGTCA CAACCAGCGC AATCCGGGCA AGGAGGTGCT GGTGCTCAAC
CACTCCTCCA TCGACCCCGA GCTGACGGGC AAGGCCTGCA GCTTCTGGCA CTTCATGTTC
GATGCCAACA CCGCCATGCG CATGCAGGCG ATTGCCAGCT ATATCAAGAC CCAGCCCGGC
ATCCGCAAGG TCTACCTGCT CAACCAGGAC TACGCCCACG GCAAGCAGTG GGCGGCCTAC
GGGCGCCAGA TGGTGAGCGC GGCCCGGCCC GACATCCAGT TCACGGGCGA GATGCTCCAC
CCCATAGGCC GGGTCAAGGA CTTCGCGCCC TATGTGGCCA AGATCAAGGA AACGGGTGCG
GACTCGGTGA TCACGGGCAA CTGGGGCCAG GACCTGACCC TGCTGCTCAA GTCGGCCGCC
GACTCGGGCT ATGACCTGCG CTACTTCAAC CACAGCGCGG GCGGCATGCC GGGCACGGTG
ACATCCTTCG CCCAGACCCG CATCGGCCAG CTGACCTGGG TGGCCGAATG GCACCCGGGC
CAGGCCGGCC GCCCGCTGGC CGACGCCCGC GCCCAGGAAT ACAAGGCCCG CATGGGCAAG
GACTTCATGG CCCCGCGCAT GGACCTGGTG CCGCGCATGC TGGCCGCCGC CATGGCCAAG
GCACAGTCCA CCGAACCCGT GAAGATCGCG CTGGCCATGG AGGATTTGCA GATGGACACC
GTGGTCGGCC CTGTGCGCAT GCGCGGCAAG GACCACCAGC TGCTGCTGCC CCAGGTGGTC
AACACCATCG CGCCCGTGGA CGGCAAGCTG GTCAAGGCCG GCTGGGAAGG CACGAACTAC
GGCTTTCGCA CCGATGCCGT CTACACGCCC GAGCAGGTGG AATTGCCCAC GTACTGCCAG
ATGAAGCGGC CTGGCGGGCG CTGA
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| Protein sequence | MPIRRHCIRR YSQPSIVLAT ALLCATAAHA QGGETFKIAF IDPLSGPFVS TGELMRDHVQ
YAVEDVNAKG GLFNGAKLQL LQFDSKLSAQ ESQAALQAAI DQGARVVVTG GSGSSVVAAL
VQAASRHNQR NPGKEVLVLN HSSIDPELTG KACSFWHFMF DANTAMRMQA IASYIKTQPG
IRKVYLLNQD YAHGKQWAAY GRQMVSAARP DIQFTGEMLH PIGRVKDFAP YVAKIKETGA
DSVITGNWGQ DLTLLLKSAA DSGYDLRYFN HSAGGMPGTV TSFAQTRIGQ LTWVAEWHPG
QAGRPLADAR AQEYKARMGK DFMAPRMDLV PRMLAAAMAK AQSTEPVKIA LAMEDLQMDT
VVGPVRMRGK DHQLLLPQVV NTIAPVDGKL VKAGWEGTNY GFRTDAVYTP EQVELPTYCQ
MKRPGGR
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