| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1069 |
|---|
| Symbol | |
|---|
| ID | 5746624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1179351 |
|---|
| End bp | 1180076 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296149 |
|---|
| Product | alanine racemase domain-containing protein |
|---|
| Protein accession | YP_001562099 |
|---|
| Protein GI | 160896517 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.32851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA TTGAAAACAA GCTTCAACAG ATTCACGAAC GGATTGCCTC GGCCTGCGCG
CAGGCGGGCA GGGCATCCGG CTCGGTGCAA TTGCTGTCCG TCTCCAAGAC CTTCGGCGCC
GACGCCGTGC GCGAGGCCGT GCTGGCCGGC GAGCGCAGCT TCGGCGAGAA CTACATCCAG
GAGGGCGTGG ACAAGATCGC CGCCGTGCGC GCCATGGGCC TGCCGGGCGG CGAGACCCTG
CAATGGCATT GCATAGGCCC CATCCAGAGC AACAAGACGC GCCTGGTGGC CGAGCATTTC
GACTGGGCCC AGACCGTGGA CCGCCTGAAG ATCGCCGAGC GCCTGTCGGC CCAGCGCCCC
GAGGGCCTGG CGCCGCTGCA GGTCTGCATC CAGCTGAACG TGGATGGCGG CGAGACCAAG
GCCGGCGTGG CGCCGCAGCA GGCGCTGGAG CTGGCCGCCG CCATCGTGCA GCTGCCGCGC
CTGGCGCTGC GCGGCGTGAT GAGCATTCCC GACGATGCGC CGGGCTTCGA GGCCCAGCGC
GAGGTGCATG CGCGCGCCAC CACCGTCTTC GAACAGATCC GCGCCAGCGG CCTGCCGGGG
CTGGAGCGCT TCGACACGGT TTCCATGGGA ATGACCGGCG ACCTGGAAGC GGCCGTGGCC
GCAGGCAGCA CGATGGTGCG CGTGGGCAGC GGCATCTTCG GCCAGAGAAA CTACGCCCCG
CGCTGA
|
|---|
| Protein sequence | MTTIENKLQQ IHERIASACA QAGRASGSVQ LLSVSKTFGA DAVREAVLAG ERSFGENYIQ
EGVDKIAAVR AMGLPGGETL QWHCIGPIQS NKTRLVAEHF DWAQTVDRLK IAERLSAQRP
EGLAPLQVCI QLNVDGGETK AGVAPQQALE LAAAIVQLPR LALRGVMSIP DDAPGFEAQR
EVHARATTVF EQIRASGLPG LERFDTVSMG MTGDLEAAVA AGSTMVRVGS GIFGQRNYAP
R
|
|---|
| |