Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1064 |
Symbol | |
ID | 5746619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1174380 |
End bp | 1175111 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641296144 |
Product | transport-associated protein |
Protein accession | YP_001562094 |
Protein GI | 160896512 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.21469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCC GTTGGTCCCG CGCCGCCTGC GCCGTGCTCG CCGTCGCGTC CCTGGGCGCC GCCCTGTCGG GCTGCGTCGC CCTGGTGGGC GGCAGCGCCG TGATGGCCGG CATGTCGGTG GCGGACCGCC GCACCACCGG CACCCAGGTG GAAGACCAGG GCATCGAGTT GCGCGCCAAC AACCGCATCG CCGAAGTGCT GGGCGACAAG GCCCATGTCA ACGTCACCAG CTACAACCGC CAGGTGCTGC TGACCGGCGA GGCCGGCAAT GAGGCCGACC GCCAGACCAT CGAGAAGCTC GTGCGCGAGC AGCCCACGGT GCGCAATGTC TTCAACGAAG TGGTGGTGGC TCCCTTCACC TCCACGCTGA GCCAGCGCTC CAAGGACACG CTGATCACCA CCCAGGTCAA GGCCAGCCTG CTGGACGCCA AGGACATCCA GGCCTCGGCC TTCAAGGTCG TGACCGAGAA CAAGGTCGTC TTCCTGATGG GCATCGTCAC CCCGCGCGAA GCCAAGCGCG GCGCCGAGAT TGCACGCGGC ATCAACGACG TGACCAAGGT CGTGCGCGTG GTGGAAGTCA TCTCCGAGGA CGAACTGGCC CGCATGCAGC CCCAGTCCGC CCCCGTGGTC ACCGACGACT CCGGCAAGGC CGCCGCAGCC AGCGCTCCCA CCAGCCTCTC GGAAAGCAGC CTGTCCACCC CCGCAGGCGC CACCGCCACC CCGGTGAAGT GA
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Protein sequence | MKFRWSRAAC AVLAVASLGA ALSGCVALVG GSAVMAGMSV ADRRTTGTQV EDQGIELRAN NRIAEVLGDK AHVNVTSYNR QVLLTGEAGN EADRQTIEKL VREQPTVRNV FNEVVVAPFT STLSQRSKDT LITTQVKASL LDAKDIQASA FKVVTENKVV FLMGIVTPRE AKRGAEIARG INDVTKVVRV VEVISEDELA RMQPQSAPVV TDDSGKAAAA SAPTSLSESS LSTPAGATAT PVK
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