Gene Daci_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1062 
Symbol 
ID5746617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1173285 
End bp1173701 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content72% 
IMG OID641296142 
Producthypothetical protein 
Protein accessionYP_001562092 
Protein GI160896510 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.340253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTCC TTGCGAAAAA GCCGGCAGGC GCGGGGCCGT CTGCCCTCAC GACCCGGCAT 
CGGGGCCAGC AGGCCGAGGA TGCGGCGCTG GCCCATCTGC AGGCGGCCGG CCTGCGTCTG
GTCGAGCGCA ATTATCGGAC GCCGGGCCGC GGCGGCGGCG AGATCGACCT CATCGTGCAG
GCGCGCAACG GCACCGTGGT CTTCGTCGAG GTGCGCAGCC GTGGCACGCG CGCCTTCGGC
GGTGCCGGCG CCAGCATCGG TGCCACCAAG CAGCGGCGCA TCGTATTTGC GGCGCGCCAC
TACCTGATGC GCTGGTCCGC GCCGCCGCCA TGCCGCTTCG ACGTGGTGCT GGTCGAGCCC
GGCGCCTGGC CCTCCGTGCA GTGGCTGCAG GCCGCCTTTG ACGCCGAAGG CGCCTGA
 
Protein sequence
MGFLAKKPAG AGPSALTTRH RGQQAEDAAL AHLQAAGLRL VERNYRTPGR GGGEIDLIVQ 
ARNGTVVFVE VRSRGTRAFG GAGASIGATK QRRIVFAARH YLMRWSAPPP CRFDVVLVEP
GAWPSVQWLQ AAFDAEGA