Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1056 |
Symbol | |
ID | 5746611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1166542 |
End bp | 1167489 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641296136 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001562086 |
Protein GI | 160896504 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.586464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCC GCTATCTGCT CAGCCGCATC GCCCAGGCCG CCCTGGTGCT GTGGGCGGCC TTCACGGTCT CGTTCATCCT GCTGCAGCTG CTGCCGGGCG ATGCCGTGCT GATCAAGTTC CTGAACCCCG AGCTGGGCCT GGGCCCGCAG GAGATTGCCG ACATCCGCGC CGCCTACGGC TCGGACCAGC CCGTGTGGCA GCAGTACCTG CACACGCTGG GCCAGTTCCT CACGGGCCAT TTCGGCTATT CGCTGCAGGC CGGCGTGCCG GTGAGCCAGG GCCTGGCCAC TAGCCTGCCG CCCACGCTCA AGCTCGCGGC CCTGGGCTTT GCCGCAGCCG CGCTGCTGGC CGTGGCGCTG GCGGCGGCTG CCAGCCTGGC GCCCTTTGCC TGGCTGCGCA ACGCGCTGTA TTCGCTGCCT TCGGTCTTTG TCTCGGTGCC CGTGTTCTGG CTGGGGATCA TGCTGATCCA GGTGGTGTCG TTCCGCCTGG GCTGGATCGC CGTGATCAAT CCCGGCCCCT GGGAAGGACT GGTGCTGCCC ACGCTGACCC TGGCCGTGCC GATCTCGGCG CCGCTGGCCC AGGTGCTGCT GCGCAATATC GACGCCGTGC TGGCCCAGCC CTTCGTGGCC GTGGCGCGGG CCAAGGGCGC CTCGCGCCGC TGGGTGCTGC TGCGCCATGT GGCACGCAAT GCCCTGCTGC CCACGCTGAC CATTGCCGGC GTGCTGTTCG GCGAGCTGCT GGCCGGCGCC GTGGTGACGG AGGCCGTGTT CGGCCTCAAC GGCCTGGGCA CGCTGACCCA GCAGGCCGTG GGCAACCAGG ACACGGCCGT GCTCCAGGCC GTGGTGGTCG TCTCGGCCGC CGCCTTCGTA CTCATCAACC TCGCCGTGGA CCTGCTGTAC CCGCTGCTTG ATCCGCGCCT GCGCCATTCC GTGGAGAACC GGCCATGA
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Protein sequence | MPRRYLLSRI AQAALVLWAA FTVSFILLQL LPGDAVLIKF LNPELGLGPQ EIADIRAAYG SDQPVWQQYL HTLGQFLTGH FGYSLQAGVP VSQGLATSLP PTLKLAALGF AAAALLAVAL AAAASLAPFA WLRNALYSLP SVFVSVPVFW LGIMLIQVVS FRLGWIAVIN PGPWEGLVLP TLTLAVPISA PLAQVLLRNI DAVLAQPFVA VARAKGASRR WVLLRHVARN ALLPTLTIAG VLFGELLAGA VVTEAVFGLN GLGTLTQQAV GNQDTAVLQA VVVVSAAAFV LINLAVDLLY PLLDPRLRHS VENRP
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