Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1054 |
Symbol | |
ID | 5746609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1163901 |
End bp | 1165592 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641296134 |
Product | ABC transporter related |
Protein accession | YP_001562084 |
Protein GI | 160896502 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.763117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CCATCGAGGA GCGCATCCAC GCCGCACCAG CGGTGGCAAC GACCGCCCCC GTGCTCGAAG TGCAGGACCT GGCCGTGGCC TACCGCGATG CCGCAGGCCA GGCGCAGCGC GTGGTGCACG GCGTGTCGTT TTCCGTGGCG CCGGGCGAGG TGGTGGCCCT GGTCGGCGAA TCGGGCTCGG GCAAGACCAC CACGGCCCAG GCCGTGATCG GCCTTTTGGC CGACAACGGC CACCGCGAGC ACGGCAGCAT CCGCCTGCAG GGCACCGAGG TCTCGGGCTG GCCGGCCGCA CGCTGGAACG CCATCCGCGG CCGCGTGGTC AGCCTGGTGC CGCAGGACCC CACCATGTCG CTGAACCCCG TGCGCACGGT AGGCGACCAG GTGGGCGAGA TCCTGCGCAT CCACGGCCTG CGCGACCGCA CGGCCGTGGA GGCGCGCGTG CTGGAGCTGC TGGACCGCGT GGGGCTGTCC CAGCCCGCGC TGCGCGCACG CCAGTATCCG CACGAGCTGT CGGGCGGCAT GCGCCAGCGC GTGCTGATCG CCATCGCCAT CGCGCTGCGG CCCGCCCTCA TCATTGCCGA CGAGCCCACC AGCGCGCTGG ACGTGACCGT GCAGCGGCGC ATCCTGGACC TGATCGACGC GCTGCGCCGC GAGACCGGCA CGGCCGTGCT GCTGGTCACG CATGACCTGG GCGTGGCGGC CGACCGTTCA CACCGCCTGG TCGTCATGCA GGGCGGCCGC ATCCAGGAGC AGGGCCCCAC GCTGGAGCTG CTGCGCAATC CGCAAAGCGC CTATACGCGG CGGCTGCTGG CCGATGCGCC TTCCCTGGCG CCCGCACCGC GCCGCACGCC CAGGCCCGCC ACGGCCGATG ACTGGGCCAT CGAGGTCGAG GACCTGGTGC ACGAGTTCGC GGCGCCCGGC CATGCCTCGG CCCACGGGCG CGGCATCTTC CGTGCCGTGG ACGGCGTGTC GCTGCGCGTG CGCCGGGGCA GCACGCATGC CATCGTGGGC GAGTCGGGCT CGGGCAAGAC CACCACCATC CGCGCCATCG TGGGCCTGGG CCGGCCCACG GCGGGCCGCA TCCGCATCGA AGGCACCGAG GTCACGGGCC TGCGCGGCGA GGCCCTGCGC CAGCTGCGCC GCCGCGTGCA GCTGGTCTAC CAGAACCCGT TCAGTTCTCT GGACCCGCGC CAGAGCGTGT TCGACATCAT CGAGGAGCCC CTGCTGAACT TCGACCCGCT GCCGGCCGAT GAGCGCCGCC AGCGCGTGCA CGACATGCTG GAGCGCGTGG GCCTGCCTGC CGCCGTGCTG CAGCGGCGCC CGCATGCGCT GTCGGGCGGC CAGCGCCAGC GCGTGGCGAT TGCGCGCGCC CTGGTGCTGC AGCCGCAGGT GCTGGTGCTG GACGAGGCCG TATCGGCCCT GGACGTGACG GTGCAGGCGC AGATCCTGGC CCTGCTCGCC CAGCTGCAGC AGGACCTGGG GCTGACCTAT CTCTTCATCT CGCACGACCT TGCCGTGGTG CGCCAGATCG CCGACACGGT GTCGGTGCTG CGCGCGGGCC GGGTGGTGGA CGCGGGCAGC GTGGAGGAAG TGTTCCAGCG CCCGACCAGC GACTACACGC GCGAACTCAT GGACGCCATT CCCGGCAAAA GGAGCATTGA TTTTGTCCCT CATACCGCCT GA
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Protein sequence | MSAAIEERIH AAPAVATTAP VLEVQDLAVA YRDAAGQAQR VVHGVSFSVA PGEVVALVGE SGSGKTTTAQ AVIGLLADNG HREHGSIRLQ GTEVSGWPAA RWNAIRGRVV SLVPQDPTMS LNPVRTVGDQ VGEILRIHGL RDRTAVEARV LELLDRVGLS QPALRARQYP HELSGGMRQR VLIAIAIALR PALIIADEPT SALDVTVQRR ILDLIDALRR ETGTAVLLVT HDLGVAADRS HRLVVMQGGR IQEQGPTLEL LRNPQSAYTR RLLADAPSLA PAPRRTPRPA TADDWAIEVE DLVHEFAAPG HASAHGRGIF RAVDGVSLRV RRGSTHAIVG ESGSGKTTTI RAIVGLGRPT AGRIRIEGTE VTGLRGEALR QLRRRVQLVY QNPFSSLDPR QSVFDIIEEP LLNFDPLPAD ERRQRVHDML ERVGLPAAVL QRRPHALSGG QRQRVAIARA LVLQPQVLVL DEAVSALDVT VQAQILALLA QLQQDLGLTY LFISHDLAVV RQIADTVSVL RAGRVVDAGS VEEVFQRPTS DYTRELMDAI PGKRSIDFVP HTA
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