Gene Daci_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1050 
Symbol 
ID5746605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1159996 
End bp1161501 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content66% 
IMG OID641296130 
Productanion transporter 
Protein accessionYP_001562080 
Protein GI160896498 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA AGATCGCCTC GCTGTTCCAC TATTTCAAGG CGGCCGTGCC GTTCCGGCTG 
GTGCCGGCAC TGATTGCCAC CGCCGTGCTG TTCGGCCTGC TGCTGATGCC CGTGCCCGAG
GGGCTGACGC CCAAGGGCTG GCAGCTGGTC GCCATTTTCC TGACCACCAT CGTGGCCATC
ATCCTCAAGG TCATGCCCAT CGGCGTGATG GCCTTGATGG CCATCGTCAT CGTCTCGCTG
TCCCAGGTCA CCTCCGGCTC GTCCAAGGGT GCCATCACCG ATGCGCTGAG CAGCTTTTCC
AGCCCGCTGA TCTGGCTGAT CGTGGTGGCC ATCCTGATCT CGCGCGGCCT CAAGAAGACG
GGGCTGGGCA GCCGCATCGG CCTGATGTTC ATCGCCCTGC TGGGCAAGCG CACCATCGGC
ATCGGCTACG GCCTGGCGAT CTGTGAGCTG GTGCTGGCAC CGTTCACCCC CAGCAACACG
GCGCGCGGCG GCGGCATCGT GCACCCGATC ATGAAGTCCA TCGCCAATGC CTTCGATTCG
GACCCGGCCA AGGGCACGCA GGGCAAGGTG GGCACCTACC TGGCCCTGGT CAACTACCAC
GCCAATCCCA TCACCTCGGC CATGTTCCTG ACCGCCACCG CGCCCAACCC GCTGGTGGTG
GATTTCGTGG CCAAGGCCAC GGGCCAGGCC CTGCACCTGA GCTGGACCAC CTGGGCGCTG
TACATGCTGC TGCCGGGCCT GCTGTGCCTG CTGCTGATGC CGCTGGTGAT CTACCTGCTG
TCGCCGCCCG AGCTCAAGGC CACGCCCAAT GCCGTGGAGT ACGCGCGCAG CGAGATGGCG
CGCATGGGGC CGCTGTCGGG CAAGGAGCGC GTGATGCTGG GCACCTTCGG CCTGATGCTG
CTGCTGTGGG CCAACGTGCC GCAGATGCTG TTCGGCCCGG CCTTCGTGCT GGACCCCACC
GTGGTCGCCT TCCTGGGCCT GTTCGTGCTG ATCATCACGG GCACCATCGA CTGGGATGAC
GTGCTGTCCG AGAAAAGCGC ATGGGATACC CTGGTCTGGT TCGGCGCCCT GGTCATGCTG
GCCGAGCAGC TCAACAAGCT CGGCGTGGTG TCCTGGTTTG CCGTGGGCAT GAAGAACGCC
ATCGTCGCCA GCGGCCTGGA CTGGCTGCCG GTGGCGGCCA TCCTGGTGGG CGTGTTCGTG
TTCTCGCACT ACCTGTTCGC CAGCACCACG GCCCACATCA GCGCGATGAT GCTGGCCTTC
CTGACCGTGG GCGCGCAGCT GATTCCGGCC GACTATGTCG TGCCCTTCAT GCTGATGATG
ACGGCCGGCT CGGCCATCAT GATGACGCTG ACCCACTACG CCACCGGCAC CTCGCCCATC
ATCTTCGGCA GCGGCTACGT CACGCTGGGC AACTGGTGGC GTGTGGGTGC GGCCATGTGC
GTGATCGAGC TGCTGATCTT TGCCGTGGTC GGCAGTGTCT GGTGGAAGCT GCTGGGCCTG
TGGTGA
 
Protein sequence
MLEKIASLFH YFKAAVPFRL VPALIATAVL FGLLLMPVPE GLTPKGWQLV AIFLTTIVAI 
ILKVMPIGVM ALMAIVIVSL SQVTSGSSKG AITDALSSFS SPLIWLIVVA ILISRGLKKT
GLGSRIGLMF IALLGKRTIG IGYGLAICEL VLAPFTPSNT ARGGGIVHPI MKSIANAFDS
DPAKGTQGKV GTYLALVNYH ANPITSAMFL TATAPNPLVV DFVAKATGQA LHLSWTTWAL
YMLLPGLLCL LLMPLVIYLL SPPELKATPN AVEYARSEMA RMGPLSGKER VMLGTFGLML
LLWANVPQML FGPAFVLDPT VVAFLGLFVL IITGTIDWDD VLSEKSAWDT LVWFGALVML
AEQLNKLGVV SWFAVGMKNA IVASGLDWLP VAAILVGVFV FSHYLFASTT AHISAMMLAF
LTVGAQLIPA DYVVPFMLMM TAGSAIMMTL THYATGTSPI IFGSGYVTLG NWWRVGAAMC
VIELLIFAVV GSVWWKLLGL W