| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1034 |
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| Symbol | rplE |
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| ID | 5746588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1151017 |
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| End bp | 1151556 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641296114 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001562065 |
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| Protein GI | 160896483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000106866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGAC TGCAAAAACT GTATCGCGAA AAGATCGCGG CTGAACTCAA GGAAAAGTTC
GGCTACACCT CCTCCATGGA AGTGCCCCGT CTGACCAAGA TCACCCTGAA CATGGGTGTG
AGCGAAGCCG TGGCCGACAA GAAGGTGATG GACAACGCCG TGGCTGACCT GACCAAGATT
GCTGGTCAGA AGCCCGTGGT GACCAAGGCC AAGAAGGCTA TCGCCGGCTT CAAGATCCGT
GAAGGCCAGG CCATTGGCTG CATGGTGACC CTGCGTGGCG TTCAGATGTA TGAATTCCTG
GACCGTTTCG TTACCGTGGC TCTGCCCCGC GTGCGTGACT TCCGTGGTAT CTCCGGCCGT
TCTTTCGACG GTCGCGGCAA CTACAACGTC GGCGTCAAGG AACAGATCAT CTTCCCCGAA
ATCGAGTACG ACAAGGTGGA CGCTCTGCGT GGTCTGAACA TCAGCATCAC GACGACAGCT
CGGACCGACG ATGAGTGCAA GGCACTGCTC GCCGCTTTCC GTTTCCCCTT CAAGAACTGA
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| Protein sequence | MARLQKLYRE KIAAELKEKF GYTSSMEVPR LTKITLNMGV SEAVADKKVM DNAVADLTKI
AGQKPVVTKA KKAIAGFKIR EGQAIGCMVT LRGVQMYEFL DRFVTVALPR VRDFRGISGR
SFDGRGNYNV GVKEQIIFPE IEYDKVDALR GLNISITTTA RTDDECKALL AAFRFPFKN
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