Gene Daci_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1029 
Symbol 
ID5746583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1145542 
End bp1145850 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content65% 
IMG OID641296109 
Productputative integral membrane protein 
Protein accessionYP_001562060 
Protein GI160896478 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCT GGATGGCCTG GACGCTGCCG GTGGCGGTGT TCTTCAGTTG CATCGTGCTG 
ATGCTGGTGG GCATGACGCT GTGGGAGTTG CGCAGCCCGA CCGTGATGCG CAAGGGCTGG
CTGCCGATGG CGACGACGCG CGGGGACCGG CTGTTCATCG GGCTGCTGCT GGCGGCCTAT
GTCAATCTGG CCTGGGTGGG CCTGGGCGAG AGGATGGCGC AGTGGTTCTC GCTGGAGGCC
GAGCCTTCGG TGTGGATCAG CCTGGTGCTG TCCATGCTCG TGCTGGCCGT CGTGATGCGC
AAAGGCTGA
 
Protein sequence
MFSWMAWTLP VAVFFSCIVL MLVGMTLWEL RSPTVMRKGW LPMATTRGDR LFIGLLLAAY 
VNLAWVGLGE RMAQWFSLEA EPSVWISLVL SMLVLAVVMR KG