Gene Daci_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1019 
Symbol 
ID5746573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1134104 
End bp1135096 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID641296099 
Producthypothetical protein 
Protein accessionYP_001562050 
Protein GI160896468 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGCC CCCCTTCACG CCACCTTTCC CGCCGCCAGC TGCTGCTGGC CACGGCCGCC 
GCATGCCTGC TGGGGCCGTC CGGCACGGCA TCCGCGCAGG GCGCCACCCC GCTCAAGCTG
GTCATCACCT TCCCGCCGGG GGGCAGCACC GACATCGCCG CCCGCATACT GCAGCCGCGC
CTGGGTGAGG TGGCCGGCCG CCCGGTGATC GTCGAGAACC GCCCCGGCGC CGCCAGCCAG
ATCGCCACCC AGTACGTGGC CAAGTCGGCC CCGGACGGCA ACACCCTGCT GTTCAGCTTC
GACACCCATG CCATCAACCC CATCGCCAAG TCCCGGCTGC CCTACGACAC CTTCAAGGAC
TTCACGGGCG TGTCGCTGGC GCTGCGCTTT CCGCTGGTGA TCGGCGCTTC GGCCTCGGTG
CCCGCCAAGG ACCTGGCCGG CTTCCTGGAA CTGGCGCGCC GCAACCCGGG CAAATACAGC
TACGCATCGA CCGGCCTGGG GTCCATGAAC CACCTGGTGA TGGAGGACAT CAAGCGCCGC
TCGGGCACCT ACGTGCTGCA CGTGCCCTAC GGCGGCGGCG GCCCGGCCGT GCAGGCCGTG
CTCGGCAATG TGTCCGACCT CACCCTGCTC AGCTACGCGG CGCTGCGCGG CCAGATTTCG
GCGGGCAAGA TCAAGCCGCT GGCGGTGACC GGCCTCAAGC GCCTGCCCGA ACTGCCCGAC
GTGCCCACCG TGGCCGAGTC CGGCTTCCCG GGCTTCGAGG CCTATTCGTG GATCGGCGTG
TTCGCGCCTT CCGCCACGCC GGCAGCCACG GTGCACAAGC TCACCGAAGA CTTCCAGGCC
ACGCTGAACA CGCCCGACAT CCGCAGCAAG CTCATGCAGT CGGGCTTTGA AGTCATGGCC
ACGGACGGAC CCGCCCTCGA CCGCTGGGTG CGCCAGGAAT ATGAGCGCTG GGGCCGCTTC
GTGCGCGACA ACAAGGTCCA GCTCGAAGAC TGA
 
Protein sequence
MPCPPSRHLS RRQLLLATAA ACLLGPSGTA SAQGATPLKL VITFPPGGST DIAARILQPR 
LGEVAGRPVI VENRPGAASQ IATQYVAKSA PDGNTLLFSF DTHAINPIAK SRLPYDTFKD
FTGVSLALRF PLVIGASASV PAKDLAGFLE LARRNPGKYS YASTGLGSMN HLVMEDIKRR
SGTYVLHVPY GGGGPAVQAV LGNVSDLTLL SYAALRGQIS AGKIKPLAVT GLKRLPELPD
VPTVAESGFP GFEAYSWIGV FAPSATPAAT VHKLTEDFQA TLNTPDIRSK LMQSGFEVMA
TDGPALDRWV RQEYERWGRF VRDNKVQLED