Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1013 |
Symbol | |
ID | 5746567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1128785 |
End bp | 1129750 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641296093 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001562044 |
Protein GI | 160896462 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0736859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTA CCGAACTCAA ATACATCGTG GCCGTGGCAC GTGAAAAGCA TTTTGGCCGC GCCGCCGAAG CCTGTTATGT GTCCCAGCCC ACGTTGTCCG TGGCGATCAA GAAGCTGGAG GAGGAGCTCG ATGTCAAGCT CTTCGAGCGC AGTGCCGGCG AAGTGTCGGT CACGTCGCTG GGCGAGGAGA TCATCCGTCA GGCGCAAAGC GTGCTGGAGC AGGCCGCCGA GATCAAGGAA ATCGCCAAGC GCGGCAAGGA CCCGCTGTCC GGCGTGCTCA CCCTGGGTGT GATCTACACC ATCGGCCCCT ACCTGCTGCC GGACCTGGTG CGCAACTCCA TCATGCGCAC GCCGCAGATG CCGCTGATGC TGCAGGAGAA CTACACCATC AAGCTGCTGG AGATGCTGCG CACCGGCGAG ATCGACTGCG CCATCGTCGC CGAGCCCTTC CCCGACACCG GCCTGGCGCT GGCGCCGCTG TACGACGAGC CCTTCATGGC CGCCGTTCCC AGCACCCATG CGCTGGCCCA GAAGGACCAT GTCTCCACCA GCGATCTCAA GAACGAGACC ATGCTGTTGC TGGGCTCGGG CCACTGCTTC CGCGACCATG TGCTCCAGGT CTGCCCCGAG TTCGCACGCT ATGCCAGCAA TGCCGAAGGC ATTCGCCGCA CCTTCGAAGG CTCGTCGCTG GAGACCATCA AGCACATGGT GGCCGCCGGC ATGGGCGTGA CCCTGGTGCC GCGCCTGTCC GTGCCCGCCG ATGCGCTGGA GACCACGGCG CGCCGCCGCA AGACCGATGA GCCGCACATC CGCTACCTGC CCATCCTCGA GGACGACGGC TCGCCTCCGC CGACACGCCG CGTGGTCCTG GCCTGGCGCC GCAGCTTCAC GCGCTACGAG GCCATCGCCG CCCTGCGCAA CGCGGTCTAC GCCTGCGCCT TGCCCGGCGT CAAACGCCTG TCCTGA
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Protein sequence | MTLTELKYIV AVAREKHFGR AAEACYVSQP TLSVAIKKLE EELDVKLFER SAGEVSVTSL GEEIIRQAQS VLEQAAEIKE IAKRGKDPLS GVLTLGVIYT IGPYLLPDLV RNSIMRTPQM PLMLQENYTI KLLEMLRTGE IDCAIVAEPF PDTGLALAPL YDEPFMAAVP STHALAQKDH VSTSDLKNET MLLLGSGHCF RDHVLQVCPE FARYASNAEG IRRTFEGSSL ETIKHMVAAG MGVTLVPRLS VPADALETTA RRRKTDEPHI RYLPILEDDG SPPPTRRVVL AWRRSFTRYE AIAALRNAVY ACALPGVKRL S
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