Gene Daci_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1010 
Symbol 
ID5746564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1123754 
End bp1125013 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content68% 
IMG OID641296090 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001562041 
Protein GI160896459 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGC GTATCAATGT CCAGCATGTC ACTCTGGGCA TGTTCCTGCA CGAGTTCTGC 
GGCTCCTGGA TGGAGCATCC TTTTTGGCGA ACCCGTTTCC TGCTCCGCTC CGAGGCCGAC
CTCCAGCGCC TGCGCTCCAC CTCCATCCAG GAGGTCTGGA TCGACGTGCG CAAGGGCCTG
GACGTGGGTG TCCAGGTGCC TTGCCTGCGC TTTGACCCGC AGGACGAGCT TCGCCACCAG
ATCCCGGACA GCGCCCGCCC TGTCTCCGAG CAGAGCACGG CCCCCATTTC CACCGCCACC
GAGCTGCGCC GCGCCGCCCA GACCTGCGTG CAGGCCAGGC AATTGCTCAG CCGCCTGTTC
AGCGACGCGC GGCTGGGCCG GCCCGTGGAC GCCACGGCCG CCGGGCAGCT GGTGGACGAT
GTGACGGCCT CCGTGGCGCG CAATCCCCAT GCCCTGATCG GCCTGGCACG GCTGAAGACG
GCCGACGACT ACACCTACAT GCACAGCCTG GCCGTGTGCG CGCTGATGGT GGCGCTGGCC
AAGCGCATGG GCCTGGACGA CCACAGCCTG CGCAAGGCCG GCATGGCCGG TCTCATGCAC
GACCTGGGCA AGACCGCGAT TCCGGTCGCC GTGCTCAACA AGCCCGGGCC GCTGGACGAT
GCGGAATGGG CGCTGATGCG CGCCCACCCA CGCCATGGCG AGCAGCTGCT GCGCCCGCTG
GGCCTGGACG ACGAGGTCAT CGATGCCTGC CTGCACCACC ACGAAAAGGT GGACGGCAGC
GGCTACCCCG ACGGACTGCA GCAGGGCGAC ATCGGCCTGC TGGCGCGCAT GACGGCGATC
TGCGATGTCT ACGACGCCAT CACCTCGGAC CGGCCCTACA AGAAGGGCTG GCCGCCCTCG
GAGGCGCTGC GGCGCATGGC CGAGTGGAGC CCCCGCCATT TCGACAAGCG GCTGTTCGAG
CAGTTCGTGC AGACCGTGGG CATCTATCCG CTGGGCTCGC TGGTGCGCCT GCATTCGCAG
CGCCTGGCCG TCGTGGTCGA TGCCTCGCCG GGCAGCCTGC TGGCGCCGCG CGTCAAGGTG
TTCTATTCGC TGCGCCAGGC CTGCCGCATC ACGCCCGAGA TCGAGGACCT GTCCGAAAGC
CAGGGCAACG ACCGCATCAT CGCGCGCGAG GACCCGGCGA ACTGGGACTT CCCGGATCTG
GAGACGCTGT GGCTGGAGTT CGAACGCCAG CCCCAGACAC AGGCCCAGAT GGCCAAGTGA
 
Protein sequence
MLKRINVQHV TLGMFLHEFC GSWMEHPFWR TRFLLRSEAD LQRLRSTSIQ EVWIDVRKGL 
DVGVQVPCLR FDPQDELRHQ IPDSARPVSE QSTAPISTAT ELRRAAQTCV QARQLLSRLF
SDARLGRPVD ATAAGQLVDD VTASVARNPH ALIGLARLKT ADDYTYMHSL AVCALMVALA
KRMGLDDHSL RKAGMAGLMH DLGKTAIPVA VLNKPGPLDD AEWALMRAHP RHGEQLLRPL
GLDDEVIDAC LHHHEKVDGS GYPDGLQQGD IGLLARMTAI CDVYDAITSD RPYKKGWPPS
EALRRMAEWS PRHFDKRLFE QFVQTVGIYP LGSLVRLHSQ RLAVVVDASP GSLLAPRVKV
FYSLRQACRI TPEIEDLSES QGNDRIIARE DPANWDFPDL ETLWLEFERQ PQTQAQMAK