| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1009 |
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| Symbol | |
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| ID | 5746563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1122555 |
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| End bp | 1123721 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296089 |
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| Product | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase |
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| Protein accession | YP_001562040 |
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| Protein GI | 160896458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGACAAT GGCGGACTTC CGTTCAACGA ACTTGGAACG GGCCCTGTCC GGCCCTCAAG
CACTGCATGT CCTCCCTGTC CCGTGTGTTT TCGCTCAGCG ATTTCGACTT CGAGCTTCCT
GAGAACCTGA TCGCCCAGCA TCCTGCCGCC CAGCGCAGCG CCTCGCGCCT GCTCGACGGC
CGCGACGATG CCACCCCGCC CACCGACCGC ATCTTCCACG AGCTGCCCGA CCTGCTGCAG
CCCGGCGACC TGCTGGTGTT CAACGACACG CGCGTGCTCA AGGCGCGCAT CTTCGGCGAG
AAGGCCAGCG GCGGCCGGCT GGAGCTGCTG GTCGAGCGCG TGCTCGAAGG CAACGATGTC
GTGGCCCACA TGCGCGTCAG CAAGAAGCCC CTGCCCGGCT CGCGCATCCA CCTGTGCGGC
GGCAAGAACC GCGGCGGCTT CGACGCCGTG CTGCGCGGCC GCTGGCCCGA CGAGAACGGC
CCGCTGTTCC ACCTGAGCTT CGAAGGCCCG CGCGGCGAGA CGCCGCACGA GCTGATGGAG
CGCTTCGGCC ACCTGCCGCT GCCGCCCTAT ATCGAGCGCC ACCAGGACAC CGGCAACGAC
CCCGATGCCG CCGAAGACAG CGAGCGCTAC CAGACCGTCT TCGCGGCCCG CCCCGGCGCC
GTGGCCGCGC CCACGGCCGC CCTGCACTTT GACGACGCCG TGCTGGCCCG TCTGGCCGAG
CGCGGCATCG AGCGCGCCAG CGTCACGCTG CACGTGGGCG CCGGCACCTT CCAGCCCGTG
AAGACCGAGA ACCTGGCCGA CCACCAGATG CACAGCGAGT GGTACGAGAT CCCGCTGGCC
ACGCTGGCTG CGCTGGAACG CTGCCGCCAG CGCGGCGGCC GCGTCGTCGC CGTGGGCACG
ACCACGGTGC GCACGCTGGA GTCCTGGGCC CAGACAGGCC AGTTCTCCGG CGACACGCGC
ATCTTCATCA CGCCCGGCTT CGAGTACCAG GTGGTCGATC TGCTGATCAC CAACTTCCAC
CTGCCCAAGA GCACGCTGAT GATGCTGGTC AGCGCCTTCG CGGGCTACGA GCAGGTGATG
GCGCTGTACC GCCATGCGAT TGCGCAGGAG TACCGCTTCT TCAGCTATGG CGACTCCATG
CTGTTGAAGA AGAAAAGCAC CCCCTGA
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| Protein sequence | MRQWRTSVQR TWNGPCPALK HCMSSLSRVF SLSDFDFELP ENLIAQHPAA QRSASRLLDG
RDDATPPTDR IFHELPDLLQ PGDLLVFNDT RVLKARIFGE KASGGRLELL VERVLEGNDV
VAHMRVSKKP LPGSRIHLCG GKNRGGFDAV LRGRWPDENG PLFHLSFEGP RGETPHELME
RFGHLPLPPY IERHQDTGND PDAAEDSERY QTVFAARPGA VAAPTAALHF DDAVLARLAE
RGIERASVTL HVGAGTFQPV KTENLADHQM HSEWYEIPLA TLAALERCRQ RGGRVVAVGT
TTVRTLESWA QTGQFSGDTR IFITPGFEYQ VVDLLITNFH LPKSTLMMLV SAFAGYEQVM
ALYRHAIAQE YRFFSYGDSM LLKKKSTP
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