Gene Daci_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1008 
Symbol 
ID5746562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1121616 
End bp1122374 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID641296088 
ProductABC transporter related 
Protein accessionYP_001562039 
Protein GI160896457 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4604] ABC-type enterochelin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG TGCGTGATCT GCTCAAGCGC CATGGCGGCA CGGCAGTGCT GCAGGAGCTC 
AATTTCGATG TGCCCGAGCG GGCGCTGACG GCCATCATCG GGCCCAACGG TGCGGGCAAG
TCCACGCTGC TGTCCCTGGT CAGCCGCCTC ATGCCCATCA CGGCGGGCAA GGTGCGGGTG
GCCGGCCTCG ACGTGGCCAC CACGCCCACC GAGGCGCTGG CGCGCATCAT GGCCATCCTG
CGCCAGGACA ACCAGAGCAC GCTGCGCCTG ACGGTGCGCG ACCTGGTGGG CTTTGGCCGC
TTTCCGCACA GCAAGGGCCG GCTGGGCCCC GAAGACCTGC GCCATGTGGA CGAGGCGATG
GAGTACCTGC AGCTCACGCC GCTGGCCGAG CGCTTTCTCG ACGAGCTGTC AGGCGGCCAG
CGCCAGCGCG CCTACATCGC CATGGTGCTG TGCCAGGACA CGCCCTTCAT CCTGCTGGAC
GAGCCGCTGA ACAACCTGGA CATGGCCCAC GCCGTCAGCA TGATGGGCCT GCTGCGCCGC
GCCGTCACCG AACGCGGCAA GACCGTGGTC ATGGTGCTGC ACGACATCAA CTTCGCCTCC
TGCTACGCCG ACCACATCAT CGCGCTCAAG GACGGCCGCC TGGCCGTGGC GGGCACGCCG
GCCGAGGTCG TGCAGGACGA GGTCCTCAGC AGCCTCTACG GCATCCCCGT CAGCGTGCAC
GAAGTCAAGG GCCGCAGGCT TTGCCATTAC TTTGGTTGA
 
Protein sequence
MIEVRDLLKR HGGTAVLQEL NFDVPERALT AIIGPNGAGK STLLSLVSRL MPITAGKVRV 
AGLDVATTPT EALARIMAIL RQDNQSTLRL TVRDLVGFGR FPHSKGRLGP EDLRHVDEAM
EYLQLTPLAE RFLDELSGGQ RQRAYIAMVL CQDTPFILLD EPLNNLDMAH AVSMMGLLRR
AVTERGKTVV MVLHDINFAS CYADHIIALK DGRLAVAGTP AEVVQDEVLS SLYGIPVSVH
EVKGRRLCHY FG