Gene Daci_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1004 
Symbol 
ID5746558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1116794 
End bp1118569 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content72% 
IMG OID641296084 
Productputative esterase 
Protein accessionYP_001562035 
Protein GI160896453 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2382] Enterochelin esterase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAG CTGCACGACA AGGCCTGTGC CTGGCCACCT CGCTGCTGTG CCTGCTGGGC 
GCAGCCGTCC ATGCCGGTGA AGACATGACG GCAGCCGCAT CGCGGCAGGC CCTGGCCGCA
CGGCCGGGCA CGCTGGCGCC GGGCCAGGCG GCCACAGGGG TCCTGGCTGC CGGTGGGCGC
GAGTCCTGGC GCGTCGATCT GCCCGCCGGC CACGTGGTCC AGGGTGAATT CGAAGGGCAG
GGCGTGGCCC TGGACCTGGA GGATGCCCAG GGCCGACACC TGCGCCGCCT GGCGCGGCCC
GATGGCGGCG CGCAGTCGCT GATGTGGGTC ACGGAGGGAG CCGGCAGGCA AAGGCTGGTG
GCGCGCCACA TCGCAACGGA CGCGCTGATG GCCGGCGAGG TGAAATCCGC AGCCGGCCGC
TTTGCGCTGC GGTTGACCTC CAGTCTTGCG CCGTTGGGCG CCAAGGCTGT GCAGGCCTCG
GAGCGGCCTG CACTGGAAAG CCCACGCCTG CAGGCCCTGG CGCAGGCCAT CCAGCGCGGC
GCGGGTTCGG GCGTGGCGGC AGACGCCTTC TGGCGGCGCG TGCAGGAGGA GGGCACGCCG
ATGGTGGAGC CGCTGCCCGG CGGCCAGTCC CTGGTCACCT TCCTGTGGCG TGGCCAGCCG
CGCGCCGGCA TGCAGGGGGT TCGCCTGTTC GGCAGCCCGG CCGGCAACCA TGATCCGCTG
CAGCATTTGG CCGGCAGCGA TGTCTGGTGG GCCAGCTTCC GCATGGCCGA CAACGCGCGG
CTCAGTTACC GCCTGGCGCC CGATGTGCCG CTGATCGCAG GCTCGGCCAT GGAGCAGCGC
CGCGCCCTGC TGGCCACGGC GCAGCGCGAT CCGCTCAATC CCAAGGTGTT TCCGCAGCCG
CCAAAGTCGC CTCAGGGCGG CTTCATCGAC GCCTTCCAGG GCGCCTCCGT GCTGGAGCTG
CCCAAGGCAC CGCCCCAGCC CTGGGTGGCG CCGCGCGCGG GCGTGGCCCG GGGGGCGCTG
GTGCAGCACC GCCTGTCCAG CCGCGTTCTG GGCAACAGCC GCGATGTCTG GACCTACCGC
CCGGCGGGCG GCCAGGCGCC CGAGGCGCTT CTGGTGCTGT TCGACGGCAA CGCCTATGCG
AAGCAGGTGT CCACGCCCAC CCTCATCGAC AACCTCATGG CCGACGGCCT GATCCCGCCC
ACGGCCGTGG TGCTGGTGGA CAACGCCAGC CCGCAGGCGC GCGGCAGGGA GTTGCCGCCC
AACACCGCCT TCGCACGCTT TCTGGATGAG GAACTGATGC CCTGGGTGGG TGAACAGGGC
CTGGGCCAGC CGGCGGCACG CACGGTGATC GGTGGCTCCA GCTTTGGCGG CCTGGCCTCG
GCCTATGCGG GTCTGGTCAA TGCGCGCTGG TTTGGCAACG TGCTGAGCAT GTCGGGATCG
TTCTGGTGGT CGCCGGCCGG CGAGGTGCCG GGCTGGGTGC AGCGCCGCTA TGCCCAGGAG
CCGCGCCAGC CCGTGCGCTT TTATCTGGAT GCAGGCCGCT ACGAGCGCGC ACGCGGCGGG
CAGGACGGCA TCCTGGAAAC CAACCGCCAC CTGGCCGATG TGCTGCGCGC CAAGGGCTAC
GAGGTCACCC AGGCCGAGCA CGAGACCAGC CATGACTATC TGCAGTGGCA GGGCTCGCTG
GCCTGCGGCC TGGTGGCCCT GCTCAACCCT GGGCGCTTTG CCCAGGGCCT GCCGGCCTGC
GAGCGCATGC CGGACGGCAC GCCTGCACTT CCCTGA
 
Protein sequence
MAQAARQGLC LATSLLCLLG AAVHAGEDMT AAASRQALAA RPGTLAPGQA ATGVLAAGGR 
ESWRVDLPAG HVVQGEFEGQ GVALDLEDAQ GRHLRRLARP DGGAQSLMWV TEGAGRQRLV
ARHIATDALM AGEVKSAAGR FALRLTSSLA PLGAKAVQAS ERPALESPRL QALAQAIQRG
AGSGVAADAF WRRVQEEGTP MVEPLPGGQS LVTFLWRGQP RAGMQGVRLF GSPAGNHDPL
QHLAGSDVWW ASFRMADNAR LSYRLAPDVP LIAGSAMEQR RALLATAQRD PLNPKVFPQP
PKSPQGGFID AFQGASVLEL PKAPPQPWVA PRAGVARGAL VQHRLSSRVL GNSRDVWTYR
PAGGQAPEAL LVLFDGNAYA KQVSTPTLID NLMADGLIPP TAVVLVDNAS PQARGRELPP
NTAFARFLDE ELMPWVGEQG LGQPAARTVI GGSSFGGLAS AYAGLVNARW FGNVLSMSGS
FWWSPAGEVP GWVQRRYAQE PRQPVRFYLD AGRYERARGG QDGILETNRH LADVLRAKGY
EVTQAEHETS HDYLQWQGSL ACGLVALLNP GRFAQGLPAC ERMPDGTPAL P