| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1003 |
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| Symbol | |
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| ID | 5746557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1114513 |
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| End bp | 1116789 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296083 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001562034 |
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| Protein GI | 160896452 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTATC CGGCCTGTGT CCGAGTGTGT CCGAGTGGCT CCGGGCTGGA TGCGGCGCAT
TTCCTTCCGT CTCGAAAGCC CTCCCGGATG TCTTCCCGTA CCCGCATCGG CCTGCCGCGC
GCAGGCGCCG TCAGCCCCTT CACCCCTGTT TGCCCCCCTG TTTGCACGCT CCACCGCCTG
GGCACCATCG CCCGTGTCTG CGCCATGGTG GCTGCCGCGG CGCTGCCCGC CGGCGCCTGG
GCCGCTGACG CCGAGCTGGG CGAGGTCACG GTGCGCGGCA CCACCGATCC CCAGACCCTT
CCCACGGTGG CCCCGGGCGG CCAGGTGGCC AAGGGTGCGG GCCTGGGCGT GCTGGGCCAG
CGCGATGTGA TGGACACGCC GTTCAACATC ACCTCCTACA CGGCCGAAGG CATTGCCAAC
CAGAACGCGG CCACGCTGAT GTCGGTGCTG GAAAACGATC CTTCGGTGCG CTTCACCACC
AACACCGGCC ATGCCTACGA GAACTTCACC ATCCGCGGCC TGGGGGTGAA TGCCTCGGAG
CTGGGCTTCA ACGGCCTGTA TGGCCTGGCG CCCGACGGCC ACGTGCCCGT CGAGATGATC
GAGCGCGTGG AGGTGCTCAA GGGCCCCGGT GCGCTGATGA GCGGCATGAC GCCCGGCGGC
GCCGTGGGCG GCACCATCAA CCTGGTGACC AAGCGCCCGC TGGCCCGGGA TCTCACGCGC
GTGACCACCA TGTTCAGCAG CGGCTCGCAA CTGGGCCTGC AGGCCGATGT CTCGCGCCGC
TTCGGCCCCG AGCGCCGCCT GGGCATACGC GTCAACGGCA GCACTTCGAG CGGCGACACC
GAGATCGACG GCCAGAACCG CCGCCATGGC CTGGGCGCGC TGGCGCTGGA CTACCAGGGC
GACGGTTTCA CGCTGGGGCT GGATGCCTAC AGCTACCGCT CCACCATCCG CGACGGCAGC
CCGATGATGG TCAGCATGCA GAACCTCAAG CAGGTCATCG CGGCGCCCGA CGCCACGACC
AACCTGTTCC CCGGAATACA CGCCAAGCAG CAAAGCGATG CGCTGATGCT GCGCGGCTCG
GTGGACCTGG GCGCGGACTG GACGCTGTTC GGCTCCGCAG GCACGGCGCA GCATGCCTAC
GACGGCATGC TCAACGGCAC GCGCGTGGTG CTGCGCGCCC AGGGCGACGG CTCGGCCGTG
GGCCAGACCT ACAACCAGTA CGGCTATACC GACAGCACGG CGGCCGAGTT CGGCGTGCGC
GGGCGCCTGC GCACGGGCGG CGTGAACCAC CTGCTGGTGG CCTCCCTGAA CTGGATGAAC
CAGAAGGGCG GGCGCGCGGC CGTGGCCACC AGCGCCAGCT ACATCACCAA CATCTACAAC
CCCGCGCCCA TCACGCTGGC CGGCCCCTAC GGCGCCATCA AGCAGGAGCG CGACGATGTG
CTCAGCAGCC TGGCCCTGGC CGACACGCTG AGCTGGGGCG GCGATGCCGT GCAACTGACC
GTGGGCGCAC GCCTGCAGCG CGTGAACCAG AAGATGGCGG GCTACAACGA GCAGGCCGTC
TCGCCCGCGC TGGGCCTGGT GGTCAAGCCC TGGGGCGATG CGGTCTCGCT GTACGCCAAC
CATGTGCAGG GCCTGAGCGC GGGCTCCATC GTCGGCGCCA CCTATGCCAA TGCCGGCGAA
GTGTTCGCGC CCTACAAGAC CAAGCAGTTC GAGATCGGCG CCAAGTGGCG CACGGGTGAT
TTCACGCAGA CGGTCTCGCT GTTCCAGATC GAGCGGCCCT CGTCCGTGGT GGAGACCGCG
ACCAACCGCC TGCTGATGGA TGGCGAGCAG CGCAACCGGG GCCTGGAGTG GAATGTGTTC
GGCGAGCCGC TGCGCGGCAC GCGCGTGCTG GGCGGCCTGG CCTACACCCA GGCCATCCAG
AGCAAGACCC AGGGCGGCGC GCGCGATGGC TTTGGCGTCT ACGGCGTGCC GCGCTGGACG
GCCAACCTGG GCGGCGAATG GGATGTGCCC GCGCTGCCGG GCGCCACGCT CACCGGTCGC
CTGATCTACA CGGGTGCGCA ATGGGTGAAT TCGGCCAACA CGCTGAAGAT GCCCAGTTGG
ACCCGCGTGG ACGTGGGCGC GCGCTATGCC ACCCGCATCG CGGCCAAACC CGTCACCTTC
CGCGCCACGG TGGAGAACCT GTTCGACAAG TCCTACTGGG CCGGCAGCTT CAACGACAAC
TTCGCCACCA CGGGCGGCCC GCGCACGGTG CGTGTCTCGG CCACGGTGGA CTTCTGA
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| Protein sequence | MPYPACVRVC PSGSGLDAAH FLPSRKPSRM SSRTRIGLPR AGAVSPFTPV CPPVCTLHRL
GTIARVCAMV AAAALPAGAW AADAELGEVT VRGTTDPQTL PTVAPGGQVA KGAGLGVLGQ
RDVMDTPFNI TSYTAEGIAN QNAATLMSVL ENDPSVRFTT NTGHAYENFT IRGLGVNASE
LGFNGLYGLA PDGHVPVEMI ERVEVLKGPG ALMSGMTPGG AVGGTINLVT KRPLARDLTR
VTTMFSSGSQ LGLQADVSRR FGPERRLGIR VNGSTSSGDT EIDGQNRRHG LGALALDYQG
DGFTLGLDAY SYRSTIRDGS PMMVSMQNLK QVIAAPDATT NLFPGIHAKQ QSDALMLRGS
VDLGADWTLF GSAGTAQHAY DGMLNGTRVV LRAQGDGSAV GQTYNQYGYT DSTAAEFGVR
GRLRTGGVNH LLVASLNWMN QKGGRAAVAT SASYITNIYN PAPITLAGPY GAIKQERDDV
LSSLALADTL SWGGDAVQLT VGARLQRVNQ KMAGYNEQAV SPALGLVVKP WGDAVSLYAN
HVQGLSAGSI VGATYANAGE VFAPYKTKQF EIGAKWRTGD FTQTVSLFQI ERPSSVVETA
TNRLLMDGEQ RNRGLEWNVF GEPLRGTRVL GGLAYTQAIQ SKTQGGARDG FGVYGVPRWT
ANLGGEWDVP ALPGATLTGR LIYTGAQWVN SANTLKMPSW TRVDVGARYA TRIAAKPVTF
RATVENLFDK SYWAGSFNDN FATTGGPRTV RVSATVDF
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