| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1000 |
|---|
| Symbol | |
|---|
| ID | 5746554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1112374 |
|---|
| End bp | 1112733 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641296080 |
|---|
| Product | sigma 54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_001562031 |
|---|
| Protein GI | 160896449 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGA CGATTAGTGG GCATCACCTG GAGGTCACTC CCTCGCTGCG CAGTTACGTC
ATGGCCAAGC TCGAACGCAT TCTTCGACAC TTTGACCAGG TGGTGGATGT AAAGGTCTTG
CTGACCGTTC ATAACCAAAA GGAGAAGGAA AAGCGCCAAC GTGCCGGTTG CACGCTGCGC
GTCAAGGGCC AGGATCTTTT TGTCGAGACC TCTCACTTCG ATCTCTACGC CGCCGTCGAT
GCGCTGGCTG ACAAGCTGGA CCGCGTGGTG GTGCGCTACA AGACCCGCCA GCAGGGCAGC
CGCTATGGTT CGGCCAAGCG ACTCGATGAT GCTGGGCTGA CCTTGGCGTC AGTCGGGTGA
|
|---|
| Protein sequence | MNLTISGHHL EVTPSLRSYV MAKLERILRH FDQVVDVKVL LTVHNQKEKE KRQRAGCTLR
VKGQDLFVET SHFDLYAAVD ALADKLDRVV VRYKTRQQGS RYGSAKRLDD AGLTLASVG
|
|---|
| |