Gene Daci_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0978 
Symbol 
ID5746532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1088914 
End bp1090047 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content69% 
IMG OID641296058 
ProductGDSL family lipase 
Protein accessionYP_001562009 
Protein GI160896427 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG3240] Phospholipase/lecithinase/hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAATC GTTATCGAAT CCTCGCGGCC GCTCTGGCCA CGGCCGGCCT GCTGGCCGCA 
TGCGGCGGCG GCAGCGGCGC TGACACCACC CCCCGCGCCA AGATCACCTC CGTCAAGGTG
ATGGGCGACA GCCTCTCCGA CAGCGGCACC TTCGGCTACA AGTTCACCGT GCAGAACGCC
ACGCTGACGG GCGCCGGCTC CAACCAGGTC TGGGCCGAGC GCGTGGCGGG CCTGTACAAC
ATCTCCCTGT GCCCGCGTTT CAACGGCACG GCCTTCACGC CCAACACGGC CTGCAACAAC
TACGCCGTGG GCGGTGGCCG CATCAACTAC ACCAGCGCGC CCACTGCGCC CATCTCCATC
ACGCAGCAGA TCCTGCTGGC CGGCGCGGCA GGCTTCACGG CCGATGACCT GGCGGTGATC
GACGGCGGCG CCAATGACGC GGCCGACGTG GTCGGCGCCT TCCTGGCCGC CTCCAGGGAC
CAGGGTGCGA GCTTCAAGGC ACTGCTGTCC ACCAAGATCG ACGCGGCCAC GCTGGGCGCG
CTGCTGCAGC AGGGCCAGGC CGGCATGGCC CAGGCCGGTG GCCTGTACAT GCAGAACCTG
GCCAAGGGCT TTGTCTCCAG CATCCAGACC AATGTGCTGG GCAAGGGCGC CACGCGCGTG
GCCATCCTCA ACGTGCCCGC CATCACGCTG ACGCCGCGCT TCCAGCTGGT GCTGCAGTCC
GTGGCCCAGC AGCAGGGCTC GGCCGCCGCC GCGCAGCTGG AGACCGTGTT CGACGGCTGG
GTCAAGGCCT TCAACCAGCA GGTCGCGGCC GGTTTCACGG GTGAGAGCCG CGTGGCCATC
ATCGACTTCT ACAGCGAGTT CCGCCAGCAG ATGGCCGACC CCGCCCAGTA CGCGTACACC
AACGTGAAAA AGCCGGCCTG CCCGGCCACC GGCGTGGGCG CCGACGGCCT GCCCACCTAC
AGCTTCCCGA CCTGCACCGA GGCCGCGCTG TCCGCCTCCA TTCCCGTGGG CGAGACCAGC
GCCAACTGGT GGAAGAGCTA TGCCTTTGCC GACAGCTTCC ACCCCACGCC CTACGGCCAC
CAGCAAATGA GCCAGCTGGC CTCCCGCACC CTGGCCCGCG CCGGCTGGCT GTGA
 
Protein sequence
MANRYRILAA ALATAGLLAA CGGGSGADTT PRAKITSVKV MGDSLSDSGT FGYKFTVQNA 
TLTGAGSNQV WAERVAGLYN ISLCPRFNGT AFTPNTACNN YAVGGGRINY TSAPTAPISI
TQQILLAGAA GFTADDLAVI DGGANDAADV VGAFLAASRD QGASFKALLS TKIDAATLGA
LLQQGQAGMA QAGGLYMQNL AKGFVSSIQT NVLGKGATRV AILNVPAITL TPRFQLVLQS
VAQQQGSAAA AQLETVFDGW VKAFNQQVAA GFTGESRVAI IDFYSEFRQQ MADPAQYAYT
NVKKPACPAT GVGADGLPTY SFPTCTEAAL SASIPVGETS ANWWKSYAFA DSFHPTPYGH
QQMSQLASRT LARAGWL