Gene Daci_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0970 
Symbol 
ID5746524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1081054 
End bp1082067 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID641296050 
Producthypothetical protein 
Protein accessionYP_001562001 
Protein GI160896419 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGC GTCCAGCCCT GCCGTTGTCC CTTGTGTCCG CATTCCCGGT CCTGTCCATC 
GTCTGTGCCA TGGCGTGGAG CCAGGGAGCC CTGGCGCAGG CCGGCGCTGC CTTTCCGGCC
AGGCCGGTCA CGCTGGTCGT GCCGTTTCCC CCGGGAGGCC CCAGCGATGC GCTGGCCCGT
GCCGTGGCTC AGAAGATGGG GGAGCATCTG GGCCAACCCC TGGTGATCGA GAACCTGGGT
GGCGCCAATG GAACCATCGG CCTGAACCAG GCGCGCAAGG CCGCCGCCGA CGGCTACACC
CTGTCCTTTG GCGGCATAGG CACGCATGTG GTCAATGTGG CCTTGTACCG CAAGCTGCCC
TATGACCCCG TGGCCGACTT CGCCCCTGTG GGACCTGCGG GCGCGGCGCC CATGCTGCTG
CTGGCGCGTG CCAATCTGCC GGCCTCCGAT CTGCGCCAGT TCGCCGAGTG GCTCAAGCGC
AACCAGGCCG CAGCCTCCTA TGGCAGCGCC GGCGTGGGCT CGATATCGCA CTATGGGTGC
GTGCTGCTGC TGTCGGCGCT GGGCCAAAGC CCCACCCATG TTCCCTATCG CGGGATCGCG
CCTGCCATGA ACGATCTCAT GGGCGGACAG ACCGATTTCA TGTGCGACCA GACGACGACG
GCGCTGCCGC AGATCGCGGG CGGCCGCATC AAGGCGATTG CGGTGCTGGG AACACAGCGC
CTGGCTCAAC TGCCGGGCAC GGCGGCCAGC GCCGAGGCCG GCCACCCCCT GCAGGCGCGC
TCATGGAACG CGATCTTCGC ACCACGCGGC ACGCCGCCAG CGGTGCTCGC GCGGCTGACG
CGGTCGCTGC AGCACGCCAT GGGCGATGCG GGCCTGCGCG CACAGATGGC CGCGCTGGGG
GTGGAGCTGC CGTCGCCCGA GCAGGCCGTG CCGGCCACGG TCTCCGCCTT GATCGAACAG
GGACTGCGCA ACGACGTGCC TGCCCTCAAG GCCAAAGGCC AATACCTGGA TTGA
 
Protein sequence
MQLRPALPLS LVSAFPVLSI VCAMAWSQGA LAQAGAAFPA RPVTLVVPFP PGGPSDALAR 
AVAQKMGEHL GQPLVIENLG GANGTIGLNQ ARKAAADGYT LSFGGIGTHV VNVALYRKLP
YDPVADFAPV GPAGAAPMLL LARANLPASD LRQFAEWLKR NQAAASYGSA GVGSISHYGC
VLLLSALGQS PTHVPYRGIA PAMNDLMGGQ TDFMCDQTTT ALPQIAGGRI KAIAVLGTQR
LAQLPGTAAS AEAGHPLQAR SWNAIFAPRG TPPAVLARLT RSLQHAMGDA GLRAQMAALG
VELPSPEQAV PATVSALIEQ GLRNDVPALK AKGQYLD