Gene Daci_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0964 
Symbol 
ID5746518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1074868 
End bp1075893 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID641296044 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001561995 
Protein GI160896413 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAC AAACCATCAC CATCGATCCG GTGGACGGCC TGCTCAACAA AGGCCTGAAG 
AACCTCTGGT ACGCGGTCTG CCCATCGGAC TTCGTGAAGA CCCAGCCCGT GTCCGTGCGC
CGCTTCGGCC GCAAGATCGC GCTGTGGCGC GATGCCGCCG GCCAGGTCCA CGCGCTGGAA
GACCATTGCC CGCACCGCGG CGCGCCGCTG TCGCAGGGCG TGATCCTGGG CGACCGCCTG
GCCTGCCCCT ACCACGGCGT GGAAGTGCGC GGCGACGGCA CGGTGACCAA GGTCCCCGGC
AGCCCCGGCT GCAAGCTCGA AGGCTCGCGC GCGGCGCTGG CCTTCCATGC GCGCGAGGCC
CATGGCGCCA TCTTTCTCTA CAACAGCGAC AAGGCTGTTG ACGAGGCGCC CGAGTTCACG
CTGCCCGAGG AGCTGACCTC GCCCGAGTAC TCCAACTTCC TGTGCTATGC CGAGTGGCGC
AGCGACTACC GCTATGCGCT GGACAACGTC ATGGACCCCA TGCACGGCAC CTTCCTGCAC
AAGCAGTCGC ACTCCATGGC CGAGGGCGAC AGCAAGGCCA CGTTCCAGGT GCGCGAGACC
GATGACGGCT TCGTCTTCGA GAAGGTGGGT CAGCGCGGCG TGAACTTCGA CTGGACCGAG
TGGGGCAGCA CGGGCGTGCA CTGGATGCGC CTGGAGATTC CGTACCCCAA GACCGGCGGC
CCCGGCGGCA ACTTCGCCAT CGTGGCCTGC GTCACGCCCA TCAGCGCCGA CCTGTGCGCC
GTGTTCTTCT GGCGCTGCCG CAAGGTGCAG GGCTGGATGC GCGACACCTG GCGCTTCCTG
TACCGCAACC GCCTGGAGGC GCGCCACTGG GCCGTGCTGG AGCAGGACCG GATCATGATG
GAGCAGATGG AGCTGGACGC CAACGAGCGC GAGAACCTCT ACCAGCACGA CATCGGCCTG
GTGCGCCTGC GCCGCCACCT GCGCCGCCTG GCCCAGGAGC AGATCGACGA AGGCGCCGCA
TCATGA
 
Protein sequence
MNVQTITIDP VDGLLNKGLK NLWYAVCPSD FVKTQPVSVR RFGRKIALWR DAAGQVHALE 
DHCPHRGAPL SQGVILGDRL ACPYHGVEVR GDGTVTKVPG SPGCKLEGSR AALAFHAREA
HGAIFLYNSD KAVDEAPEFT LPEELTSPEY SNFLCYAEWR SDYRYALDNV MDPMHGTFLH
KQSHSMAEGD SKATFQVRET DDGFVFEKVG QRGVNFDWTE WGSTGVHWMR LEIPYPKTGG
PGGNFAIVAC VTPISADLCA VFFWRCRKVQ GWMRDTWRFL YRNRLEARHW AVLEQDRIMM
EQMELDANER ENLYQHDIGL VRLRRHLRRL AQEQIDEGAA S