| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0954 |
|---|
| Symbol | |
|---|
| ID | 5746508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1064136 |
|---|
| End bp | 1065323 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641296034 |
|---|
| Product | integrase catalytic region |
|---|
| Protein accession | YP_001561985 |
|---|
| Protein GI | 160896403 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGA AGGAGTGCGC ACCCATGGAC GAGAAACTGC TCTTCATAGC CGACCACCTG
CGCGGTGGTG CGCCGCTGAG CGAGCTGTGC AGGCGCTACG GCATCAGCCG CAAGACGGCC
TACAAGTGGG TTGAGCGTTA CCGCCAACTG GGCATGGATG GATTGCAAGA ACGCAGTCGC
AGGCCCCACG GGAACAATCA GGCGATCAGC TATGCACAGC GCCGGGCCAT CATTGAGCTG
CGCACGCAGC AAAGGTCACA GATGGGGCCC AAGAAGCTGC ACGCTTTGCT CCTGCAGCGT
TGGGGCCCAC AGGAGACACC CAGCAAAACC ACCATCTACA ACGTGCTGAA GGCTGAGGGG
CTTGTTTGCA GCAGGCGTGT ACGCAGACGC TCGGTGCCTA CGGCCCAGCC CTTGCGAACG
AGCAAGCAGC CCAATGGGGT GTGGAGTGCA GACTACAAAG GCCAGTTCAA GACAGCCGAT
GGTCACTGGT GCTATCCATT GACCATCATG GACCACGCCA GCCGCTATTT GCTGGCCGTG
CACGTCTACG ACAGCCCCAA CTACGAGGAT GCCAAACGCA GCTTCGAACA GGTGTTTCGG
CAATACGGAC TGCCCGAGCG CATACGCAGT GACAACGGTC CGCCATTCGC GACTACTGGC
GTGGCGGGCC TGTCACGCCT GGCGATATGG TGGATAAGGC TGGGCATCAG GCCGGAGCGC
ATCGAGAGGG GCAAGCCACA GCAAAACGGT CGCCACGAGC GGATGCACCG CACGCTCAAG
CATGCCCTGG GCAAAGAGCC TGCGGCGGAC AAAGCGGCAT TGCAGATGCA GCTCGATGCC
TTTGTGGAGC ACTACAACCA GCAGCGCCCG CATGAGGCCT TGCAGCAAAG CATGCCGGCC
CAGCATTACA GCGACTCGGC CAGGCCATAC CCCTCAAAGC TACCGGAGCT GCAGTACCCG
AAGCATTGGG AACGAGTTCG AGTCAGCCAC AACGGCCTGA TTTACTGGCG AGCGCTGCGG
GTCTACATCG GCTACCTGCT GGCGGGGCAG TGGATCGGGA TGCAGGAGGT GGCCGCTGGC
CAGTGGGATG TGTATCTGGG GCCGGTGCGA CTGGGCTGCT TCAACGAAGA GGATGTGCGA
GGACCCCAGA AGGACTATGT GAGCTTGAAG TGTTACCCAT GTCTGTGA
|
|---|
| Protein sequence | MPWKECAPMD EKLLFIADHL RGGAPLSELC RRYGISRKTA YKWVERYRQL GMDGLQERSR
RPHGNNQAIS YAQRRAIIEL RTQQRSQMGP KKLHALLLQR WGPQETPSKT TIYNVLKAEG
LVCSRRVRRR SVPTAQPLRT SKQPNGVWSA DYKGQFKTAD GHWCYPLTIM DHASRYLLAV
HVYDSPNYED AKRSFEQVFR QYGLPERIRS DNGPPFATTG VAGLSRLAIW WIRLGIRPER
IERGKPQQNG RHERMHRTLK HALGKEPAAD KAALQMQLDA FVEHYNQQRP HEALQQSMPA
QHYSDSARPY PSKLPELQYP KHWERVRVSH NGLIYWRALR VYIGYLLAGQ WIGMQEVAAG
QWDVYLGPVR LGCFNEEDVR GPQKDYVSLK CYPCL
|
|---|
| |