Gene Daci_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0953 
Symbol 
ID5746507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1063156 
End bp1063911 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID641296033 
Product5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_001561984 
Protein GI160896402 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CCATCCTCAG TGCCCTGCCG CAGGAACAGG AAGGCCTGGT CCATGCCCTG 
TCCGACGCCC AGGGCACGGC CCACGCCGGC CGCATGTTCT GGCGCGGGCG CCTGCATGGG
CACGACGTGG TCTGCGCGCT GTCGGGCATA GGCAAGGTGG CGGCGGCCAC CACGGCCACG
GCGCTGATCG AGCGCTTCGG CGTGCGCCGC ATCGCCTTCA CCGGCGTCGC CGGTGGCCTG
GGCGAAGGCG TGCGCGTGGG CGATGTCGTC GTGGCCGACG AATACCTGCA GCACGACCTG
GACGCCTCGC CCATCTTCCC GCGCTGGGAA ATGCCCGGCT ACGGACGCAC GCGCCTGCCC
TGCGACCCCG AAATGACCGC CGCGCTGCTG GCGGCTGCCC AGGCCTGCGT GGCCGAGGCG
GGCGAAGACC TGCGCGCCGC CCACGCCACC ACGGCGCCGC GCGCGCACCA GGGGCTGATT
GCCAGCGGTG ACCAGTTCGT GGGCACGGCG GGCGCCTCTT CCGCGCTGGC GCAGGGCCTG
CGTGCTGCAG GGCATGAGGT GCTGGCGGTG GAGATGGAAG GCGCCGCCGT GGCGCAGGCT
TGCCTGGACT ATGGCGTGCC GTTTGCTGCG ATGCGGACTG TTTCCGATCG TGCGGATGAC
AGTGCGCATG TGGACTTTGC GGAGTTTGTG CGGGTGGTGG CGAGTCGGTA TGCGTTGCGG
GTTGTTGATG GGTTTTTGCG GCGGCTTGCT GTTTGA
 
Protein sequence
MTIAILSALP QEQEGLVHAL SDAQGTAHAG RMFWRGRLHG HDVVCALSGI GKVAAATTAT 
ALIERFGVRR IAFTGVAGGL GEGVRVGDVV VADEYLQHDL DASPIFPRWE MPGYGRTRLP
CDPEMTAALL AAAQACVAEA GEDLRAAHAT TAPRAHQGLI ASGDQFVGTA GASSALAQGL
RAAGHEVLAV EMEGAAVAQA CLDYGVPFAA MRTVSDRADD SAHVDFAEFV RVVASRYALR
VVDGFLRRLA V