| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0946 |
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| Symbol | |
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| ID | 5746500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1057498 |
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| End bp | 1059177 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296026 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001561977 |
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| Protein GI | 160896395 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC GCCCATGGCT GGGTGCCTAT CCGGCAGGTG TGCCCGCCGA CATCGATCCC
TCCCAATACC CCTCGCTGGT GGCCCTGATG GAGGAGGCCT TCAGCCGCTA CGCGGACCGC
GTGGCCTATT CCTTCATGGG CAAGGAGCTG ACCTACTCGC AGGTCGATGC GCAAAGCCGC
GCCTTCGCCG CCTATCTGCA GAGCCTGGGC CTGGCCCGCG GCGACCGGGT GGCGCTGATG
ATGCCCAACA TTCCCCAGTA CCCCGTGGCC GTGGCCGCCG TGCTGCGTGC GGGCTTCGTC
GTGGTCAACG TCAACCCGCT GTACACGGCG CGCGAGCTGG AGCACCAGCT CAAGGACTCG
GGCGCCAAGG CCATCGTCAT CATCGAGAAC TTCGCCCACA CGCTGCAGGC CTGCAAGGCC
GCCACGCCCG TGCAGCACAT GGTGTTGTGC ACCATGGGCG ACCAGCTGGG CATGCTCAAG
GGCGCCATCG TCAATTACGT GGTGCGCAAG GTCAAGAAGC TGGTGCCGCC GTTCTCGCTG
CCGGGGGCCG TGCGCTTCAA CGACGCGCTG TCCAAGGGCA TGCGCTCGCC CTTCCAGGCG
CCGCAGCTGC AGGCCTCCGA CATGGCCCTG CTGCAGTACA CGGGCGGTAC CACGGGCGTG
AGCAAGGGCG CGGTGCTGCT GCACAGCAAC ATCATCGCCA ACGTGCTGCA GTCCGAGGCC
TGGAACCTGC CTGCCATGGG CAAGGTGCCG GCCGGCGAGC AGCCCACCAG CATCTGCGCG
CTGCCGCTGT ACCATATCTT CGCCTTCACG GTGAACATGA TGCTGTCCAT GCGCACGGGC
GGAAAGACCA TCCTGATCCC CAATCCGCGC GACCTCAAGG CCACGCTCAA GCAGCTGTCC
ACGCAGCGCT TTCACAGCTT TCCCGCCGTG AGCACGCTGT TCAACGGCCT GGCCAACCAC
CCGGACTTCA ATACCGTGGA CTGGTCGCAC CTGAAGGTCT CGGTCGGCGG CGGCATGGCC
GTGCAAAGCG CCGTGGCCCA GCTGTGGCTG CAAAAGACCG GCTGCCCCAT CTGCGAGGGC
TATGGCCTGT CGGAGACCAG CCCCACGGTC AGCTGCAACC CGGTCACCTC CACCGAGTTC
TCGGGCACCA TCGGCGTGCC CTTGCCCAGC ACCTATCTCA AGCTGGTCGA TGACGACGGC
AACGACGTGA CCGAACTGGG CGCGCGCGGT GAACTGGCCA TCAAGGGCCC GCAGGTCATG
GCCGCCTACT GGCAGCGCCC CGACGAAACC GCCAAGGTCT TCACCGCCGA CGGATATTTC
CGCACCGGCG ACATAGGCAC CATGGACGAG CGCGGCTACT TCAAGATCGT GGACCGCAAG
AAGGACATGG TCCTGGTCAG CGGCTTCAAC GTCTATCCCA ATGAAGTGGA AGACGTGGTC
TCCAACTGCC CCGGCGTGCT CGAATGCGCC GTGGTCGGCG TGCCCGACGA GAAGACCGGC
GAGGCCGTCA AGCTGGTCAT CGTGCGCAAG GACGACAGCC TCACCGAACA GGCCGTGCGC
GACTTCTGCC ACGACAACCT TACGGGCTAC AAGCGGCCCC GCGTGATCGA GTTCCGCACC
GAGCTGCCCA AGACCCCGGT GGGCAAGATC CTGCGCCGGG AGCTGCGCGA CAGCAAGTAA
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| Protein sequence | MSDRPWLGAY PAGVPADIDP SQYPSLVALM EEAFSRYADR VAYSFMGKEL TYSQVDAQSR
AFAAYLQSLG LARGDRVALM MPNIPQYPVA VAAVLRAGFV VVNVNPLYTA RELEHQLKDS
GAKAIVIIEN FAHTLQACKA ATPVQHMVLC TMGDQLGMLK GAIVNYVVRK VKKLVPPFSL
PGAVRFNDAL SKGMRSPFQA PQLQASDMAL LQYTGGTTGV SKGAVLLHSN IIANVLQSEA
WNLPAMGKVP AGEQPTSICA LPLYHIFAFT VNMMLSMRTG GKTILIPNPR DLKATLKQLS
TQRFHSFPAV STLFNGLANH PDFNTVDWSH LKVSVGGGMA VQSAVAQLWL QKTGCPICEG
YGLSETSPTV SCNPVTSTEF SGTIGVPLPS TYLKLVDDDG NDVTELGARG ELAIKGPQVM
AAYWQRPDET AKVFTADGYF RTGDIGTMDE RGYFKIVDRK KDMVLVSGFN VYPNEVEDVV
SNCPGVLECA VVGVPDEKTG EAVKLVIVRK DDSLTEQAVR DFCHDNLTGY KRPRVIEFRT
ELPKTPVGKI LRRELRDSK
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