| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0944 |
|---|
| Symbol | |
|---|
| ID | 5746498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1055486 |
|---|
| End bp | 1056379 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641296024 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001561975 |
|---|
| Protein GI | 160896393 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA CCCTGGACGA GTTGCAGGCC TTTCGCGCCG TGATCGACTG CGGCAGCATC
ACGGCGGCAG CCGAGCAGTT GGGACAGACC ACCTCGGGCA TCAGCCGCAG CCTGTCGCGC
CTGGAGAAAA AGCTGGCCAC CACCCTGGTA CGGCGCACCA CGCGCAGCCT GGAACTGACC
GAGGAAGGCG CGCGCTTCCT GGCCCGCGCG CGCGAGGTGC TGCAGGCCCT GGACGCGGCC
GAGGAGGAGC TGGCCGCGCG GCGCCAGGCG CCGGCCGGGC TGCTGCGCGT CAACGCGGCC
TCGCCCTTCA TGCTGCATGC CATCGTGCCG CTGGTCGGCG AGTTCCGCGC GCTCTATCCG
CTGATCACGC TGGAGCTGAA CACCGATGAC CTGCACATCG ACCTGCTGGC CCAGCGCACC
GACATCGCCA TCCGCATCGG CGAGCTGCGC GACTCCACGC TGCATGCTCG GCTGCTGTGC
CACAGCGTGC TGCGCGTGCT GGCCAGCCCC GCCTACCTGC AGGCCCATGG CCCCGTGGCG
AGCGTGGCCG CGCTGGCGCG CCACCAGCGC ATCGGCAACA GCCAGGTGCC CGGCCTGAAC
CACTGGCCGC TGCGCACGCC CGAGGGCGGC GACCGCTGGG ATGCCGCGCC CCAGCTCACG
GCCTCCAGCG GCGAGACCAT GCGCCAGCTG GCCCTGGCAG GCCAGGGCGT GGTCTGCCTG
GCCGACTTCA TGACCGTGCG AGACCGCGCC CAGGGCGAGC TGGTGCAGGT GCTGGCGCGC
GAGACCGTGC AGCAGCGCCA GCCCATCCAC GCCGTCTACT ACCGCAACAC GGCGCTGGCC
GCGCGCATCA CGGCCTTCCT GGACTTTCTC GCGCAGCGCA TGGCGCAGTC CTGA
|
|---|
| Protein sequence | MKTTLDELQA FRAVIDCGSI TAAAEQLGQT TSGISRSLSR LEKKLATTLV RRTTRSLELT
EEGARFLARA REVLQALDAA EEELAARRQA PAGLLRVNAA SPFMLHAIVP LVGEFRALYP
LITLELNTDD LHIDLLAQRT DIAIRIGELR DSTLHARLLC HSVLRVLASP AYLQAHGPVA
SVAALARHQR IGNSQVPGLN HWPLRTPEGG DRWDAAPQLT ASSGETMRQL ALAGQGVVCL
ADFMTVRDRA QGELVQVLAR ETVQQRQPIH AVYYRNTALA ARITAFLDFL AQRMAQS
|
|---|
| |