Gene Daci_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0939 
Symbol 
ID5746493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1051015 
End bp1052016 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID641296019 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001561970 
Protein GI160896388 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA AGATCGGTAT CAACGGCTTC GGCCGCATCG GCCGCATGGT GTTCCGCGCT 
GCCGTGCAGA ACTTCAGCGA CATCGAAGTC GTGGGCATCA ACGACCTGCT CGAGCCCGAC
TACCTGGCCT ACATGCTCAA GTACGACAGC GTGCACGGCC GTTTCAAGGG CGAGGTCTCG
GTGGAGGGCT CCAACCTGAT CGTCAACGGC AAGACCATCC GCCTGACGCA GGAGCGCGAC
CCCGCCAACC TGAAGTGGAA CGAAGTCGGC GCCGACATCG TGATCGAGGC CACCGGCCTG
TTCCTGACCG ACGAGACTGC ACGCAAGCAC CTGGCTGCCG GCGCCAAGAA GGTCATCATG
TCCGCGCCTT CCAAGGACAG CACCCCGATG TTCGTCTTCG GCGTGAACTG CAAGACCTAC
GCCGGCCAGG ACGTGATCTC CAACGCCTCC TGCACCACCA ACTGCCTGGC TCCCGTGGCC
AAGGTGCTCA ACGACAAGTG GGGCATCAAG CGCGGCCTGA TGACCACCGT GCACGCTGCC
ACCGCCACGC AAAAGACCGT GGACGGCCCC AGCAACAAGG ACTGGCGCGG CGGCCGCGGC
ATCCTGGAAA ACATCATTCC CTCCAGCACG GGCGCAGCCA AGGCCGTGGG CGTGGTGATT
CCCGAGCTCA ACAAGAAGCT GACCGGCATG TCCTTCCGCG TGCCCACCTC CGACGTGTCG
GTGGTGGACC TGACGGTGGA GCTGAACAGC GAAGCCAGCT ACGAAGAGAT CTGCGCCGAA
ATGAAGGCCC AGTCGCAAGG CGCGCTCAAG GGCGTGCTGG GCTACACCGA AGACAAGGTC
GTGGCCACGG ACTTCCGCGG CGAGTCCTGC ACCTCGGTGT TCGATGCCGA AGCCGGCATC
GCCCTGGACA AGACCTTCGT GAAGGTCGTG TCCTGGTACG ACAACGAGTG GGGCTACTCG
AACAAGTGCC TGGAAATGGT GCGCGTGGTC GCCGCCAAGT AA
 
Protein sequence
MTIKIGINGF GRIGRMVFRA AVQNFSDIEV VGINDLLEPD YLAYMLKYDS VHGRFKGEVS 
VEGSNLIVNG KTIRLTQERD PANLKWNEVG ADIVIEATGL FLTDETARKH LAAGAKKVIM
SAPSKDSTPM FVFGVNCKTY AGQDVISNAS CTTNCLAPVA KVLNDKWGIK RGLMTTVHAA
TATQKTVDGP SNKDWRGGRG ILENIIPSST GAAKAVGVVI PELNKKLTGM SFRVPTSDVS
VVDLTVELNS EASYEEICAE MKAQSQGALK GVLGYTEDKV VATDFRGESC TSVFDAEAGI
ALDKTFVKVV SWYDNEWGYS NKCLEMVRVV AAK