| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0938 |
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| Symbol | |
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| ID | 5746492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1048860 |
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| End bp | 1050905 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296018 |
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| Product | transketolase |
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| Protein accession | YP_001561969 |
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| Protein GI | 160896387 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA CTCAACAAAT GGCGAATGCG ATCCGCGCAC TCGCAATGGA TGCCGTTCAA
CAAGCCAACT CCGGCCACCC CGGCGCCCCC ATGGGCATGG CCGACATGGC CGTGGCACTG
TGGAGCCGTC ACCTCAAGCA CAACCCCGTC AACCCGCAAT GGGCTGACCG TGACCGCTTC
ATCCTGTCCA ACGGCCACGG CTCCATGCTG ATCTACGCGC TGCTGCACCT CACGGGCTAT
GCGCTGCCGA TCGACGAGCT CAAGAACTTC CGCCAGCTGC ACAGCAAGAC GGCCGGCCAC
CCCGAAGTGG GCATCACCCC CGGCGTGGAA ACCACCACCG GCCCGCTGGG CCAGGGCATC
ACCAATGCCG TGGGCTTCGC GCTGGCAGAA AAGCTGCTGG CTGCCGAATT CAACCGTCCC
GGCCACGCCA TCGTCGACCA CCACACCTAC GTGTTCCTGG GTGACGGCTG CCTGATGGAA
GGCATCAGCC ACGAGGCCGC GGCCCTGGCC GGCGCCTGGA AGCTGGGCAA GCTGGTGGCG
CTGTACGACG ACAACGGCAT CTCCATCGAC GGCAAGGTCG CCCCCTGGTT CATCGACAAC
ACGCCCGCCC GCTTCGAAGC CTATGGCTGG AACGTGATCC GCGACGTGGA CGGCCACAAC
GTCCAGGCCC TCGATGCCGC CATCGCCGCT GCCAAGAAGA ACAGCTCCAA GCCCACCCTG
ATCTGCTGCA AGACCAGCAT CGGCAAGGGC TCGCCCAACC GCCAGGACAC GGCCAAGGCC
CACGGCGAGC CCCTGGGCGC CGAGGAAATC GCGCTGACCC GCGCGGCCCT GGGCTGGGAG
CACGGCCCTT TCGACATCCC CGCCAGCGTC TACGGCGACT GGGATGCCAA GGCCGCCGGC
GCCAAGGCTG AAGCGGCCTG GAACAAGAAG TTCGCCGCCT ACGCCAAGGC CTTCCCCGAA
CTGGCTGCCG ACTTCACGCG CCGCATGGCC GGCGACCTGC CTGCCAACTT CGGCGAGATC
GCCGCGCAGA TCGCCTCCGA CGCGCATGAC GCAGGCGCCA CCGTGGCCAG CCGCAAGGCC
AGCCAACTGG CCCTGGAAGG CCTGACCGCA GCCCTGCCCG AACTGCTGGG CGGCTCGGCC
GACCTGACCG GCTCCAACCT GACCAACACC AAGAGCACGC CTTCGCTGCG CGTGGACGAC
AAGGGTGCCG TGGTCCTGAC CGAAGACGGC AAGATCGGCC GCCACATCAA CTACGGTGTG
CGCGAGTTCG GCATGGCCGC CATCATGAAC GGCATCGCCC TGCATGGCGG CTACATCCCC
TACGCAGGCA CCTTCCTGAC CTTCAGCGAC TACAGCCGCA ACGCCATCCG CATGGCCGCG
CTGATGAAGC AGCGCGTGGT CCACGTCTTC ACGCACGACT CCATCGGCCT GGGCGAAGAC
GGCCCCACCC ACCAGTCCAT CGAGCACGCC GCCTCGCTGC GCCTGATCCC TGGCCTGGAT
GTCTGGCGCC CTGCCGACAC CACGGAAACC GCCGTCGCCT GGACCGTGGC CCTGAGCCAG
AAGAACAAGC CCACGGCCCT GCTGCTGTCG CGCCAGAACC TGGCCTACGC AGCCAAGACC
GAAGACGCGC TGGACGACAT CGCCTGCGGC GCCTACGTGC TGTCCGAGCC CAAGGCCGTC
GGCCTGAACA AGAAGGCCCA GGCCGTCATC ATCGCCACCG GCTCCGAGGT GCAACTGGCC
CTGGCAGCCC AGAAGCTGCT GGCCGAGCGC AAGGTCGCCG TGCGCGTGGT CTCCATGCCC
AGCACCACCA CCTTCGACAA GCAGGACGCC AAGTACAAGA GCCAGGTGCT GCCGGCCAAC
CTGCCGCGCA TCGCCGTGGA AATGGGCGTG ACCGACTTCT GGTGGAAGTA CGGCTGCGCC
GCCGTCGTCG GCATCGACAC CTACGGCGAA TCGGCCCCCG CGCCCGTGCT GTTCAAGCAC
TTCGGCTTCA CGGCAGAGAA CGTGGCCGAC ACCGTGCAGG CTGCGCTGCA GCGCGCCGGC
AAGTAA
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| Protein sequence | MANTQQMANA IRALAMDAVQ QANSGHPGAP MGMADMAVAL WSRHLKHNPV NPQWADRDRF
ILSNGHGSML IYALLHLTGY ALPIDELKNF RQLHSKTAGH PEVGITPGVE TTTGPLGQGI
TNAVGFALAE KLLAAEFNRP GHAIVDHHTY VFLGDGCLME GISHEAAALA GAWKLGKLVA
LYDDNGISID GKVAPWFIDN TPARFEAYGW NVIRDVDGHN VQALDAAIAA AKKNSSKPTL
ICCKTSIGKG SPNRQDTAKA HGEPLGAEEI ALTRAALGWE HGPFDIPASV YGDWDAKAAG
AKAEAAWNKK FAAYAKAFPE LAADFTRRMA GDLPANFGEI AAQIASDAHD AGATVASRKA
SQLALEGLTA ALPELLGGSA DLTGSNLTNT KSTPSLRVDD KGAVVLTEDG KIGRHINYGV
REFGMAAIMN GIALHGGYIP YAGTFLTFSD YSRNAIRMAA LMKQRVVHVF THDSIGLGED
GPTHQSIEHA ASLRLIPGLD VWRPADTTET AVAWTVALSQ KNKPTALLLS RQNLAYAAKT
EDALDDIACG AYVLSEPKAV GLNKKAQAVI IATGSEVQLA LAAQKLLAER KVAVRVVSMP
STTTFDKQDA KYKSQVLPAN LPRIAVEMGV TDFWWKYGCA AVVGIDTYGE SAPAPVLFKH
FGFTAENVAD TVQAALQRAG K
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