Gene Daci_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0925 
Symbol 
ID5746479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1034040 
End bp1035422 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID641296005 
Productpeptidase M24 
Protein accessionYP_001561956 
Protein GI160896374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTG TTTACGCTCA ACGCCGCGCA CGCTTGGCCG CCCAGTTGGG CGCTGGCGGC 
ATCGCCATCA TTCCCACCGC TCCCGAGCGC CAGCGCAACC GGGACACCGG CTACCTGTAC
CGCCACGACA GCTACTTCTA CTACCTGACC GGCTTTGCCG AGCCCAATGC CTGCCTGGTG
CTGGCCGCCG ACGGCACCAG CGTGCTGTTC TGCCAGCCCA AGGACCTGGA GCGCGAAATC
TGGGACGGCA TCCGCCTGGG CCCCGAGGCC GCCGTGGCCA CGCTGGGCGT GAGCCAGGCG
TTTTCCAGCG CCGAGATCGA TACGCGCCTG CCCCGCCTGC TGGAGAACCG GGGCCGCCTC
TGGTATCCGT TCGCCACGCA TGAAGGCTTG GCCGTGCGCG TGGAAGGCTG GCTGGGCCAG
GTGCGCGCGC GCGTGCGCTT CGGCGCCCTG TGCCCGGCCG AGCAGGGCGA CCTGTGCACG
CTGCTGGACG AGATGCGCCT GGTCAAGGAC GCGCATGAGC AGGACATCAT GCGCCGCGCC
GCCGCCATCA GCGCCCAGGC CCATATCCGC GCCATGCAGC GCTCGGCACG CATGCTGCGC
GCAGGCCAGG AGGTGCGCGA ATACCACCTG GACGCCGAGT TGCTGCATGA ATTCCGCCAG
CAGGGCTCGC AGTACGTGGC CTACGGCTCC ATCGTGGCGG CCGGCGCCAA CGCCTGCGTG
CTGCACTACC AGGCCGACAA GGCGCCCGTG CACGCGGGCG AGCTGGTGCT GATCGACGCG
GGCTGCGAGC TCGACGGCTA CGCCAGCGAC ATCACGCGCA CTTTCCCCGC CGATGGCCGC
TTCACCGGCC CGCAGCGCGC GCTCTACGAG CTGGTGCTGG ACAGCCAGAA GGCCGCCGTG
GCGGCCACGC GCGCCGGTGC GCGTTTCAAC GATCCGCACG ACGCCACCGT GGCCGTGCTG
GCGCAGGGCA TGCTGGACCT GGGCCTGCTG GATAGAAAGG TCTATGGCAA CGCCCAGGAC
GTGATCGAGC AGCGCGCCTT CTTCCAGTTC TACATGCATC GCACGGGCCA CTGGCTGGGC
ATGGACGTGC ACGACTGCGG CAGCTATGTG GAGCCCTCGG AGCTGGGCCA GTCGCACGAG
CGCAAGGACC CGCTGTCGGG CGAGACCATC ACCAACCGCC CCAGCCGCAT CCTGCGCCCG
GGAATGTGCA CCACCATCGA GCCGGGCATC TACGTGCGCC CTGCGGCCGG CGTGCCCGAG
CAGTTCCACA ACATCGGCAT CCGCATCGAG GACGATGCCA TCGTCACCGA GACGGGCTGC
GAGCTGATCA CGCGCGGTGT GCCCGTGGAG CCCGACGAGA TAGAAGCCTT GATGCGTGAC
TGA
 
Protein sequence
MTSVYAQRRA RLAAQLGAGG IAIIPTAPER QRNRDTGYLY RHDSYFYYLT GFAEPNACLV 
LAADGTSVLF CQPKDLEREI WDGIRLGPEA AVATLGVSQA FSSAEIDTRL PRLLENRGRL
WYPFATHEGL AVRVEGWLGQ VRARVRFGAL CPAEQGDLCT LLDEMRLVKD AHEQDIMRRA
AAISAQAHIR AMQRSARMLR AGQEVREYHL DAELLHEFRQ QGSQYVAYGS IVAAGANACV
LHYQADKAPV HAGELVLIDA GCELDGYASD ITRTFPADGR FTGPQRALYE LVLDSQKAAV
AATRAGARFN DPHDATVAVL AQGMLDLGLL DRKVYGNAQD VIEQRAFFQF YMHRTGHWLG
MDVHDCGSYV EPSELGQSHE RKDPLSGETI TNRPSRILRP GMCTTIEPGI YVRPAAGVPE
QFHNIGIRIE DDAIVTETGC ELITRGVPVE PDEIEALMRD