Gene Daci_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0906 
Symbol 
ID5746460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1018518 
End bp1019504 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content72% 
IMG OID641295986 
Producthypothetical protein 
Protein accessionYP_001561937 
Protein GI160896355 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAC ATTCCACCCG CCGCCACGCG CTGGCCCTGC TCGGCACCAC CGCCGCCGCC 
TGGGCGGCCC TGCCCCTGGT CGCCACAGCG GCCGGCTACC CCGAGCGCCC CGTGACCGTG
GTCGTGCCCT ACTCGCCCGG CGGCGGCGTG GACATCATCA CGCGCCTGGT CACGCCGCCC
ATGGCCGAGC TGCTGGGCCA GTCCCTGGTG GTGGACAACA AGCCCGGCGG CGGCACCAAC
ATCGGCATGG GCGCGGTGGC ACGCGGCGCG GCCGACGGCT ACCTGCTGCT GACGGCATCC
AACACGCTGA CCACCAACAA GGCGCTGTAC GCCAAGCTCA ATTTCGATCC GCTCAAGGAC
CTCATCCCGG TGGGCCGCAT CGGCGAGGCG CCGCTGGTCG TGGTGGTCAA CGCCAAGTCG
CCCCACAAGA ACCTGGCCGA GCTGATCGCC GCCGGCAAGG CCAAGGCCGG CGCCCTGTCC
TATGGCACGG CTGGCGTGGG CAGCTCGGGC CACATGGCCA GCGCCCTACT GGAGCGCGCA
GGCGGCTTCC AGGCCGTGCA CATCCCCTAC AAGGGCGGCT CGGCCGCCGT GACCGACCTG
CTGGGCGGGC GGCTGGACTT CATGGCCATC AACCCGCTGG AGGTGGCAGG CCATGTGGGC
AGCGGCGCGC TGCGCGCCCT GGCGGTGCTC AACCACAATG GTTCGCGCCT GTTGCCGGGC
GTGCCCACGG CACGTTCGCT GGGCGTGAAT GTGCAGGCCA CCGTGTGGTG GGGCCTGGTG
GCGCCGGCCG GCACGCCGCC GGCCGTGGTG CAGGCGCTGA ACCAGGCTTT GAACAAGAGC
CTGGCCCAGC CCGCCGTGCA GCAGAAGCTG GCCGACATCG GCGCATCGCC CATGGGCGGC
ACGCCGGCCG AGTTCGGCGC CTTCATTCAG GCCGAGAGCG CCGAGCTGGG CGAGGTGATT
CGCGCCGCCA ATATCCGCGC GGACTGA
 
Protein sequence
MTRHSTRRHA LALLGTTAAA WAALPLVATA AGYPERPVTV VVPYSPGGGV DIITRLVTPP 
MAELLGQSLV VDNKPGGGTN IGMGAVARGA ADGYLLLTAS NTLTTNKALY AKLNFDPLKD
LIPVGRIGEA PLVVVVNAKS PHKNLAELIA AGKAKAGALS YGTAGVGSSG HMASALLERA
GGFQAVHIPY KGGSAAVTDL LGGRLDFMAI NPLEVAGHVG SGALRALAVL NHNGSRLLPG
VPTARSLGVN VQATVWWGLV APAGTPPAVV QALNQALNKS LAQPAVQQKL ADIGASPMGG
TPAEFGAFIQ AESAELGEVI RAANIRAD