| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0904 |
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| Symbol | |
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| ID | 5746458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1016553 |
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| End bp | 1017635 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295984 |
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| Product | porin |
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| Protein accession | YP_001561935 |
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| Protein GI | 160896353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.3308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA ACAACATCGC CCTCGCCCTC GCCCTGCTGG CCACAGGCTG CGCGGCCGGC
CCCGCCCTGG CGCAGTCCAC CAGCAGCGTG AGCCTGTACG GCATCATCGA CGTGTCGGTG
CGCGCGCAAA GCGGCCTGTC GGGCGCCAAT GCGCCGGCTG CGGGCAGCAT GGGCTCGGTC
AACAGCGGCG TGGGTCCCAC CAGCCGCTGG GGCATACGCG GCAGCGAGGA CCTGGGCGGC
GGCCTGCGCG CCATCTTCAA CCTCGAATCC ACGCTGGGCG CCGACGTGGG CGGCATCGGC
GGCGTGGCCG GCACCTTCGA CCGGGCGGCC ATCGTGGGCC TAGCCGGCCA CTGGGGCGCG
GTCACGGCTG GCCGGCAGAA CACGCTGATC TCCGACTCCG TGGGCCTGGT CGATCCCATC
GCCCTGCGCT TTGCGGGCCT GAACCCCAAC ATCCAGGTCA CCAGCCTCAC GGGCCACGGC
CTCAACAACG AATGGGGCGC CACCAACACC AAGGTGGGCT CCAACCGCGT CAACAACTCC
ATCAAGTACT CGGGCAGCTT TGGAGGCCTC ACGGCGCGCG CCATGTACAG CTTCGGGGAG
ACCGGCGTGT CGGCCTCGCG CCTGGACACG CGCGGCCTGG GCCTGGACTG GCGCCAGGAC
GACCTGGTGC TGACCAGCGC CTACACCCAG TTCCACGACG CCAGCGGACG CACGCTGGAC
GCCGCCAACA TCGGTGGCGC CTGGAGCCGT GGCGACCTGC GCCTGATGCT CAACTACGGC
CGCAACAAGG CCGAGACCAG CGACACCGCG AAAACCACGA ACAAGATCCT GGCCCTGGGC
GCGCGCTACG CCGTCACGCC CGTCATCGGC CTGAACGGCG GCTACTACAA GGTGGACCGC
GAGCGCACGG GCCAGGGCGA CGACGGCTTC CAGCGCCTGA TCGGCTTCGT GGACTACCAG
TTGTCCAAGC GCACCAGCCT GTTCCTGGAG CTGGACACGA CCAAGTGGAA GAACGGATAT
CAGGGCGCAG GCAACAAGAC ACGCGCCAGC GGCATCAGCC TGGGTATCAC TCACAATTTC
TGA
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| Protein sequence | MKKNNIALAL ALLATGCAAG PALAQSTSSV SLYGIIDVSV RAQSGLSGAN APAAGSMGSV
NSGVGPTSRW GIRGSEDLGG GLRAIFNLES TLGADVGGIG GVAGTFDRAA IVGLAGHWGA
VTAGRQNTLI SDSVGLVDPI ALRFAGLNPN IQVTSLTGHG LNNEWGATNT KVGSNRVNNS
IKYSGSFGGL TARAMYSFGE TGVSASRLDT RGLGLDWRQD DLVLTSAYTQ FHDASGRTLD
AANIGGAWSR GDLRLMLNYG RNKAETSDTA KTTNKILALG ARYAVTPVIG LNGGYYKVDR
ERTGQGDDGF QRLIGFVDYQ LSKRTSLFLE LDTTKWKNGY QGAGNKTRAS GISLGITHNF
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