Gene Daci_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0903 
Symbol 
ID5746457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1014884 
End bp1016272 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content70% 
IMG OID641295983 
Producthypothetical protein 
Protein accessionYP_001561934 
Protein GI160896352 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTG AAGACCTCTC CCTGCAGGTG CTGGCAGCAC TGCGCCGCCA GGGCGGTGCG 
CTGGCGGCGC GCGAGTTGCA GCAGATGCTG GGCGTGAGCC AGCCCACGGT GTCGCGCGCG
CTGGCACCGC TGATCCAGTC GGGCCAGGTG CGCAAGGTGG GGGCGGCGCG CACGCAGCGC
TATGTGCTGC CGCGCCAGGT GGCGGGCGTG GGCGCCGAGG TGGCCATCAT GCGCGTGGAC
ACCGAAGGCC ATGCATCACC CTTCGGCCGC ATGATCGCCC TGCACGGCGG CGGCTTCTGG
GTGGATGAGG CCGACGGCCT CAGCGAGCAG CACGACGGCC TGCCCTGGTT CCTGGACGAC
ATGCGGCCCC AGGGCTTCAT CGGCCGCAGC TTTGCGCACA GCCACCCCGA ACTACAGCTG
GGCGGCGACC CGCGCCAGTG GGGCGAGGAC GATGTGCTGC GCGCCCTGGC CCGCTTTGGC
GAAGACCTGC CGGGCAACCT CATCGTGGGC GAAGCCGCCT TCGAGCGCTT TCACTCCCTG
CCCGCGCGCA CGCTGCGCGC CGCCTCTGCG GCCGACTATC CGCGCCTGGC CATGCAGGCC
ATGCAGGGCA CGCATCCGGG CTCGTCGGCG GGCGGCGAGC AGCCCAAGTT CTGCTGCATC
ACGGCCGGAC GCAGCGTCAT CGTCAAGTTC TCCCCGGCAG GCAACGCGCC GGCCGAGCAG
CGCATCCGCG ACCTGCTGGT CTGCGAGCAC CTGGCACTGC AGACCCTGGC CGAAGACGGC
CTGCCCGCAG CGCGCACGCG GCTGTTCCTC GATGGCGGCC GCGCGTTCCT CGAATCGGAG
CGCTTCGACC GCAGCCAGCC GGCGCCGGGC GATGTGCCAA GCGTTGTGCC GGGCGATGTG
CCAGTCTCAC AGGCCCACCC GGGCAGCAAC CCTGGACGCA TCGGCATGGT GTCCCTGCAG
GTGCTCAATG CCCAGTACGT CGGCGAGGTG GACAACTGGG CAGCCACGGC CAACCGACTG
GCCGCACGCG GCCTCATCAC CGAGGCCGAC GCGCGCAGCC TGCGCCTGCT CGAAGCCTAC
GGCCAGCTCA TCGCCAACAC CGACCGGCAC TACGGCAACA TCTCCTTCGT GCTGCCGCAG
CCCCATGGCG ACTGGGCGCT GTCGCCCACC TACGACATGC TGCCCATGCT CTACATGCCC
ATCAACGGCG AGATCGTGGA GCGCGACTTC GGCGCCCAGC CCCAGCGCCC CACGGCCGCC
ACGCTGGCCG AATGGCCGCA TGCCCAGGCG CTGGCACGCC GCTTCTGGCA GACCGTGGCG
CAGGATGCGC GCATCTCCGG GGACTTTCGC AACATTGCCA CGCGAAATCT TGAATTCATG
AGTGCCTGA
 
Protein sequence
MATEDLSLQV LAALRRQGGA LAARELQQML GVSQPTVSRA LAPLIQSGQV RKVGAARTQR 
YVLPRQVAGV GAEVAIMRVD TEGHASPFGR MIALHGGGFW VDEADGLSEQ HDGLPWFLDD
MRPQGFIGRS FAHSHPELQL GGDPRQWGED DVLRALARFG EDLPGNLIVG EAAFERFHSL
PARTLRAASA ADYPRLAMQA MQGTHPGSSA GGEQPKFCCI TAGRSVIVKF SPAGNAPAEQ
RIRDLLVCEH LALQTLAEDG LPAARTRLFL DGGRAFLESE RFDRSQPAPG DVPSVVPGDV
PVSQAHPGSN PGRIGMVSLQ VLNAQYVGEV DNWAATANRL AARGLITEAD ARSLRLLEAY
GQLIANTDRH YGNISFVLPQ PHGDWALSPT YDMLPMLYMP INGEIVERDF GAQPQRPTAA
TLAEWPHAQA LARRFWQTVA QDARISGDFR NIATRNLEFM SA