Gene Daci_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0902 
Symbol 
ID5746456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1014037 
End bp1014684 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID641295982 
Producthypothetical protein 
Protein accessionYP_001561933 
Protein GI160896351 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.997566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA TTGCCCCTTC TCACGCCGCA GACCCGCGCA TCGCCGACGT GCTCAGCTAC 
TGGCTGGGCT CCGCGCATCC CGACAACGAG GGCGCCCTGG CCTGCAAGAA CCTGTGGTTC
ATCAAGTCCG ATGCCACTGA CGACCAGATC CGCGAGCGCT TCGGCGCCCT GGTCGAAGAT
GCGCTGGCCG GCCAACTGGA CGGCTGGGCC GACACGGCGC TGGGGCGGCT GGCGCTGATC
GTGTTGCTGG ACCAGTTCAC GCGCAACCTG TTCCGGGGCA CGGCACGCAG CTTTGCAGGC
GACCCGCAGG CGCTGCAACT GGCGCTGGAT GGCATCGCCC TGGGCCATGA CCGGCATGCC
GACCTGCCTG CCGTGGCGCG CATCTTCTGC TACCTGCCGC TGGAGCATGC CGAAGACCTG
GCCCTGCAGG ACCGCAGCGT GGCTGCCTTC CAGGCCCTGG CCGACCAGGC CGGTGACGCT
GGCGGCGAGG GCGTGCGCGA GTTCCTCGCC GGCACCCTTG ACTACGCCCA CCGGCACCGC
GACGTCATCG TGCGCTACGG CCGCTTTCCG CACCGCAATG CCATCCTGGG CCGCACCAGC
ACGGCCGAGG AACTGCAGTA CCTGTCCCAG CCCGGCTCAG GGTTCTGA
 
Protein sequence
MTSIAPSHAA DPRIADVLSY WLGSAHPDNE GALACKNLWF IKSDATDDQI RERFGALVED 
ALAGQLDGWA DTALGRLALI VLLDQFTRNL FRGTARSFAG DPQALQLALD GIALGHDRHA
DLPAVARIFC YLPLEHAEDL ALQDRSVAAF QALADQAGDA GGEGVREFLA GTLDYAHRHR
DVIVRYGRFP HRNAILGRTS TAEELQYLSQ PGSGF