Gene Daci_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0900 
Symbol 
ID5746454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1011451 
End bp1012296 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID641295980 
ProductDTW domain-containing protein 
Protein accessionYP_001561931 
Protein GI160896349 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTG TGCCTGCTTC GGCGCAGGAT GCCTGCGTGC CTCTGTCCTA TCTGCGCGGC 
GTGGACTCCG GCGTGGCGCC GCATGCAGTC TCGCGGCTGC GCACGCAGCG GCTGGCGCGC
AGCACGCGGC CGTTTCTGTC GCGCGGCGGG CCGCGCGGTG AGCGCTGCGA GGGTTGCCGG
CTGCGGCCTT CGCACTGCCT TTGCGCGCTG CGTCCCATGC TGCCGACGCG GGCGGGCTTT
TGCCTGTTGA TGCACGATGC CGAGCCGCTC AAGCCCAGCA ACACGGGCTG GCTGATCGCC
GATGTGGTGG AGCAGACGCA CGCCTTCGGC TGGGCGCGCA CCGAGGCTGA TGCGGGCCTG
CTGGCCTTGC TCGATGATCC GCAGTGGCAG CCCTATGTGG TGTTTCCCGG TGAGTTCGTG
GAGCCGCCGC AGCGCGTGGT GCATACGCTG CCGGCGCCCC GAGCCGGGGT CGAACCGAAC
CAAGGCCGGC GCCCGCTGTT CATCCTGCTG GACGCGACTT GGCCCGAGGC GCGCAAGATG
TTCCGCAAGA GCCCTTACCT GGACCGCTTT CCGGTGCTGA GCCTGCACCC GGACCAGGTG
TCGCAGTACC GTCTGCGCCG CTCGCAGCGC GAAGACCATT TCTGCACCAG CGAAGTGGCG
GCCCTGTGCC TGGAGCTGAC GGGCGACGTG GGTGACCGGC GTGCGGGCCG TGCGCTGGAG
AGCTACCTGG CGGTGTTCAC CGAGCACTAT CTGCGCGCCA AGAACCAGCA GCCGGTGCAG
GCAGGCAGTG ACGCGCGCCG TGGTCTGCAG GACGCGATCT CTTCCGTTTG TCCGCCTGCT
TGTTAA
 
Protein sequence
MSAVPASAQD ACVPLSYLRG VDSGVAPHAV SRLRTQRLAR STRPFLSRGG PRGERCEGCR 
LRPSHCLCAL RPMLPTRAGF CLLMHDAEPL KPSNTGWLIA DVVEQTHAFG WARTEADAGL
LALLDDPQWQ PYVVFPGEFV EPPQRVVHTL PAPRAGVEPN QGRRPLFILL DATWPEARKM
FRKSPYLDRF PVLSLHPDQV SQYRLRRSQR EDHFCTSEVA ALCLELTGDV GDRRAGRALE
SYLAVFTEHY LRAKNQQPVQ AGSDARRGLQ DAISSVCPPA C