| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0894 |
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| Symbol | |
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| ID | 5746448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1003951 |
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| End bp | 1007448 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295974 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001561925 |
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| Protein GI | 160896343 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.60496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TTACGCTGCG GCTCAAGAAC CTCAACTCGC TCAAGGGCGA ATGGCGCATC
GACTTCACGC AGGCACCGTT CGCGGGCAAC GGCCTGTTCG CCATCACCGG GGCCACGGGC
GCGGGCAAGT CCACCCTGCT CGATGCCATC TGCCTGGCGC TGTACCACCA GACACCCAGG
CTGAACAACA TCTCGGCATC GGCCAACGAC CTCATGACGC GCCACACGGC CGACTGTCTG
GCCGAGGTCG AATTCGAGGT CAAGGGGCAG GTCTACCGCG CCTTCTGGAG CCAGCGCCGC
GCACGCGACA GGCTCGATGG CGCACTGCAG GCGCCCAAGG TGGAACTGGC CCGGGGCGAC
GGCAGCATCC TCAGCAGCCA GACGCGCGAC AAGCTGGAGC AGACCGCCGC CATCACCGGC
CTGGACTTCG AGCGCTTCAC CAAGTCCATG CTGCTGGCCC AGGGCGGCTT TGCGGCTTTT
CTGCAAGCCA ATGCCAATGA GCGCGCCGGC CTGCTGGAAG AGCTGACAGG CACCGAGATC
TACGGCCTCA TCTCGCAGAA AGTCTTCGAA CGCGCCCGCG ATGCGCGCCA GCGCCTGGAC
CAGCTCAAGG CCCAGGCCGA TGGCGTGGAG TTGCTGACGC CCGAGGCACG CGATGCCCTG
CAGGCCCAGG CCGACAGCCT GGTAACGGAG CAGGCCACGC TGCAGGCCGA CTACCTGCGC
GCCCAGGCCC AGCACCAATG GCAGCAGCAA CTGGCCCAGG CCACCCAGAC ACTGCAGGCC
GCCCGCACCG GCTGCGCAGA CGCCGCCCAG GCACTGGAAC AGGCCACGCC CGAACTGGAA
AGACTGGCCC ATGACGAGCC CGCGCAGGCG CTGCAGCCGC TGCACCAGGC CTGGCAGCGC
AGCACCGCCG CCTGCGATGA CAGCCGCCAG CAACTGCAGC AACTGCGCGA GCACGAACAG
CAGACCCAGG CCCGCCTGCT GCTGCAGCAC CGCCATGCCC AGGCCCTGTC CGCCCGCCTG
GCCCAGGCTG CGCAAGACAC CCTGGCCCGC CAGCAGGCCG AGCACCAAAC GCTGGAACAG
TTCTGCACCC AGCATGCCGC CCATGCCCTG CTGGGCGAGC GACTGGGCAG CTGGCGCCAG
CAGTTCAAGC TGCGCGCCAG CCAGCAACAG CAAGCGGCCA ACCAGCAGCA AGCCCTGCGC
AAGCTGGATG CCGAACAGGC CCGCATGGCG CAAAGCGCCG AAGCCGGCAC GGCCCAGGTC
CAAGCCGCCA CCGACGCCCA GGCCCGCGTC AGCGCCGCAC TGCAGCATGC GCAGGACGAA
CAGGCGCAGC GCCTTCAAGG CAGCGGCGGC ATGGCCGAGT TGCGCGCGCG CGAGCAGGCA
GAGCAGGACC GCCTGCACCT GTGGCGCCAG GCAGAAACCC AGGCCGCGCA GCGCCGCGAA
CTTGCGCGCC AGCAAGCTGC GCTGGAGCAG GAATTGCGCG ATGGAGAGGC ACAGGCGCGA
GCGCAGGACA CATCACTGCA AGCCCTGCGG CAGCAGTACA AGAGCGTCAA GGAACAGGTC
GCGGACAAGC AGACCCTGCT CCTGCAGGAG CAGCGCATCC AAAGCCTGTC CGAGCACCGC
CACGCCCTGC AGCCCGGCCA GCCCTGCCCG CTGTGCGGCG CGCACGAGCA CCCGGCCGTG
GCCGCCTACG AAGCGCTGGA CGCCTCGGCC ACCGAAGCCG CGCTGCGCCG CAAGCAGGAT
GAACTCGACG CCCTGCAAAC CCAGGGCGAA ACCGCCCGCG CCACGCTGGC CGCCACCACG
GCCGCACAGG CTGCGCGCCA GCGCCAGGCC GACGAACTGG AACAAGACAT CGCACGCTGG
CACGGCACAT GGAACGACAC ATGGCAGGGC CTCACGCAAC CCCTGCAACT CGCGCCAGAC
AGTTGGCAAC AGGCCGACAC CCTCGCCGCA TCGGCCCAGG CCTGCGCCCG CCAGCTGGAT
ACGCTCAAGC GCGCCGTGCA GGCCGCCGAG CAAGGCGAGC AGGCCGTGCA ACAGGCCAAG
GACGCCGCCC AGCACAGCCG CCAGTCACTG CAGACCGCGC AAGGCCAGCT TGCGCTGCAG
CAGCAGGCCC TGGCCGACCA CAGCGCACGC CGCGAAGAAC TGCAGCAATC CATCGCCGGT
CTGCAGGCCG AAGCCCAGGC GCTGAACGCG CAGTTGCAGG CCTCACTCGG CGAGGCCGGC
CACACCCTGC CCGACGACGC CCAGCCCTGG CTTGAAGCGC GCGAAGCCGA ATGGCAGCAC
TGGCAACAGG CCCGGCACGA CCTGCAGCAA CTGGCCCAAT CCATGGCCTT GCAGCGCAAG
GAATGCGAGG CGGCCGAGGC CGATGCGCAG CGCTGGAAAA CACAGTCGGA AACACAGTGG
GAGGCGCAGT GGGAGGAGCA GAGAACGGCG CAGCCCCATC CCGCCGATAC GGCTGTGGCA
GAGCCGCCTT CACTGCCCTT GCCGCCCGTG GAACAGCTGC CGCAGGCCCT GGCCGAATGC
GCCAGCGACA TCGCCGCTCT CACGCGGCGG CAGGATGCCC TGCAAGGCCA GCAGCAACAG
GCCCAGGCCA CGCTGGCCCG CCAGCGTGAG GAAGCGGCCC AGGCCGAATC CGCATGGCAG
GCCGCCCTGG CCGCCAGCCC CTTTGCTGAC GAGTCCGCCT TCCTGCAGGC CCTGCTGCCC
GCATCCGAAC GCCAGCGCCT GGCCGCGCTG CGCCAGCAAC TGCAGGCGGC ACAACAGCGC
GCGGCTACCC TGCTGGAAGC CGCACAGCGC GAGCACGCGG ATCTGCAGGC CCAGGCCCTG
ACCGACCTGG CACCCGAAGC CATACAGGCC CTGCTGCAAA CACTGCAGGA GCGCCATACG
GCACTCAGCG AACAACTGGG CGGCACCCGT GCCCAGCTGG CCGACGACCA GCGCCGCCGC
CAGGGCCAGC AGGCCCTGTT CGAGCACATC GCCGCCCAGG CCAGCGACAG CGACCTGTGG
CAGCACCTGG ACGGCCTTAT CGGCTCGGCC AAGGGCGACA AATACCGGCG CTTCGCCCAG
GGCCTTACCC TGGACCACCT GCTGCACCTG GCCAACCTCC ACCTGGCCCG CCTGCACGGC
CGCTACCTGC TGCGCCGCAA GCCAGAGGGC GAGCTGGAAC TGGACATCGT CGACAGCTGG
CAGGGCGACA CCCCGCGCGA CACGCGCACG CTATCGGGCG GCGAGGCCTT CCTCGTCAGC
CTGGCCCTGG CACTGGCGCT GTCCGACCTG GTCAGCCACA AGACCTCCAT CGACTCTCTG
TTCCTCGACG AAGGCTTCGG CACGCTCGAT GCCGACACGC TGGAGATCGC GCTCAACGCA
CTCGACAGGC TCAACGACAG CGGCAAGATG ATCGGCATCA TCAGCCACGT GGAGGCGCTC
AAGGAGCGCA TCGCCGTGCA GGTGCGGGTG GAGAAAGGCG GTGGCGTGGG GCATTCGAGG
CTGGTGGTTT CTTCGTGA
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| Protein sequence | MKILTLRLKN LNSLKGEWRI DFTQAPFAGN GLFAITGATG AGKSTLLDAI CLALYHQTPR
LNNISASAND LMTRHTADCL AEVEFEVKGQ VYRAFWSQRR ARDRLDGALQ APKVELARGD
GSILSSQTRD KLEQTAAITG LDFERFTKSM LLAQGGFAAF LQANANERAG LLEELTGTEI
YGLISQKVFE RARDARQRLD QLKAQADGVE LLTPEARDAL QAQADSLVTE QATLQADYLR
AQAQHQWQQQ LAQATQTLQA ARTGCADAAQ ALEQATPELE RLAHDEPAQA LQPLHQAWQR
STAACDDSRQ QLQQLREHEQ QTQARLLLQH RHAQALSARL AQAAQDTLAR QQAEHQTLEQ
FCTQHAAHAL LGERLGSWRQ QFKLRASQQQ QAANQQQALR KLDAEQARMA QSAEAGTAQV
QAATDAQARV SAALQHAQDE QAQRLQGSGG MAELRAREQA EQDRLHLWRQ AETQAAQRRE
LARQQAALEQ ELRDGEAQAR AQDTSLQALR QQYKSVKEQV ADKQTLLLQE QRIQSLSEHR
HALQPGQPCP LCGAHEHPAV AAYEALDASA TEAALRRKQD ELDALQTQGE TARATLAATT
AAQAARQRQA DELEQDIARW HGTWNDTWQG LTQPLQLAPD SWQQADTLAA SAQACARQLD
TLKRAVQAAE QGEQAVQQAK DAAQHSRQSL QTAQGQLALQ QQALADHSAR REELQQSIAG
LQAEAQALNA QLQASLGEAG HTLPDDAQPW LEAREAEWQH WQQARHDLQQ LAQSMALQRK
ECEAAEADAQ RWKTQSETQW EAQWEEQRTA QPHPADTAVA EPPSLPLPPV EQLPQALAEC
ASDIAALTRR QDALQGQQQQ AQATLARQRE EAAQAESAWQ AALAASPFAD ESAFLQALLP
ASERQRLAAL RQQLQAAQQR AATLLEAAQR EHADLQAQAL TDLAPEAIQA LLQTLQERHT
ALSEQLGGTR AQLADDQRRR QGQQALFEHI AAQASDSDLW QHLDGLIGSA KGDKYRRFAQ
GLTLDHLLHL ANLHLARLHG RYLLRRKPEG ELELDIVDSW QGDTPRDTRT LSGGEAFLVS
LALALALSDL VSHKTSIDSL FLDEGFGTLD ADTLEIALNA LDRLNDSGKM IGIISHVEAL
KERIAVQVRV EKGGGVGHSR LVVSS
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