Gene Daci_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0889 
Symbol 
ID5746443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1000140 
End bp1000646 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID641295969 
Productglutathione peroxidase 
Protein accessionYP_001561920 
Protein GI160896338 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.50899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA CCGCCGCCGC GCCCCGCTCG GCCTACGACT TCGAGGCCAC CTCCATCACG 
GGCCAGGCCG TCCCCCTGTC GGACTACCGC GGCAAGGTGC TGCTCATCGT CAACACCGCC
AGCGCCTGCG GCTTCACGCC GCAGTACGCC GGCCTGCAGG CGCTGCATGA GCAGTACGGC
GAGCGCGGCC TGGTGATGCT GGGCTTTCCG TGCAACCAGT TCGGTTCTCA GGAAAAGGGC
AGCGAATCGG AAATCGCCAG CTTCTGCGAC CTGAACTTTG GCGTGCGCTT TCCGCTCATG
GGAAAGATCG ACGTCAACGG CGCCAACGCC CACCCGCTGT ACCGCTGGCT CACTGCCGAG
GCGCCGGGCG TGCTCGGCAC CAAGGCCATC AAGTGGAACT TCACCAAATT CCTCGTTGGC
CGCGACGGCC AGGTCATCCG CCGCTATGCG CCGCAGGATG CGCCGGCCAA GCTGTCCACG
GACATCGAGG CCGCGCTGGC GCTTTGA
 
Protein sequence
MNDTAAAPRS AYDFEATSIT GQAVPLSDYR GKVLLIVNTA SACGFTPQYA GLQALHEQYG 
ERGLVMLGFP CNQFGSQEKG SESEIASFCD LNFGVRFPLM GKIDVNGANA HPLYRWLTAE
APGVLGTKAI KWNFTKFLVG RDGQVIRRYA PQDAPAKLST DIEAALAL