Gene Daci_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0888 
Symbol 
ID5746442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp999329 
End bp999913 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID641295968 
ProductFerritin Dps family protein 
Protein accessionYP_001561919 
Protein GI160896337 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.505389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAC CACGTATGAA CCCCAACAGC ACCCCCACGA AGCAAGCCAA ATCCAACGCC 
GGCAACGGCC ACCTGGCGCT GGACCCCAAG GCCCTGGAGG CCGCCAAGCA CAGCCTGGAC
GATGGCGCCG TGACCCCGCA CTTCGGGCCC TGGCGCGAGG ACATCATCAA GCTGCTCAAT
GACTCGCTGG CCACCGAGCT GGTGTGCGTG ATGCGCTACA AGCGCCACCA CTTCACGGCC
GTGGGCCTGG CTTCGCCCGC CATTGCCGAC GAGTTCCTGG TCCATGCCAA CGAGGAAATG
GCCCACGCCG ACAAGCTGGC CCAGCGCATC GTGCAGCTGG GCGGCGAGCC CGACTTCAAT
CCCCAGACGC TGACCCAGCG CAGCCACGCC GACTACAACG GCGAGACGGA CCTGAAGGCC
ATGATCCGCA CCAACCTGAT CGCCGAGCGC GTGGCCATCG AGGCCTACAG CCAGATGATC
GACCTGATCG GCGACAAGGA CCCGACCACG CGCCGGCTGA TCGAATCCAT CCTGGAGCAG
GAGCAGGAAC ACGCGGATGA GCTGTCCGAC TGGCTGGAGA AATAA
 
Protein sequence
MKRPRMNPNS TPTKQAKSNA GNGHLALDPK ALEAAKHSLD DGAVTPHFGP WREDIIKLLN 
DSLATELVCV MRYKRHHFTA VGLASPAIAD EFLVHANEEM AHADKLAQRI VQLGGEPDFN
PQTLTQRSHA DYNGETDLKA MIRTNLIAER VAIEAYSQMI DLIGDKDPTT RRLIESILEQ
EQEHADELSD WLEK