Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0886 |
Symbol | |
ID | 5746440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 995110 |
End bp | 996297 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641295966 |
Product | integrase catalytic region |
Protein accession | YP_001561917 |
Protein GI | 160896335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.406047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGGA AGGAGTGCGC ACCCATGGAC GAGAAACTGC TCTTCATAGC CGACCACCTG CGCGGTGGTG CGCCGCTGAG CGAGCTGTGC AGGCGCTACG GCATCAGCCG CAAGACGGCC TACAAGTGGG TTGAGCGTTA CCGCCAACTG GGCATGGATG GATTGCAAGA ACGCAGTCGC AGGCCCCACG GGAACAATCA GGCGATCAGC TATGCACAGC GCCGGGCCAT CATTGAGCTG CGCACGCAGC AAAGGTCACA GATGGGGCCC AAGAAGCTGC ACGCTTTGCT CCTGCAGCGC TGGGGCCCAC AGGAGACACC CAGCAAAACC ACCATCTACA ACGTGCTGAA GGCTGAGGGG CTTGTTTGCA GCAGGCGTGT ACGCAGACGC TCGGTGCCTA CGGCCCAGCC CTTGCGAACG AGCAAGCAGC CCAATGGGGT GTGGAGTGCA GACTACAAAG GCCAGTTCAA GACAGCCGAT GGTCACTGGT GCTATCCATT GACCATCATG GACCACGCCA GCCGCTATTT GCTGGCCGTG CACGTCTACG ACAGCCCCAA CTACGAGGAT GCCAAACGCA GCTTCGAACA GGTGTTTCGG CAATACGGAC TGCCCGAGCG CATACGCAGT GACAACGGTC CGCCATTCGC GACTACTGGC GTGGCGGGCC TGTCACGCCT GGCGATATGG TGGATAAGGC TGGGCATCAG GCCGGAGCGC ATCGAGAGGG GCAAGCCACA GCAAAACGGT CGCCACGAGC GGATGCACCG CACGCTCAAG CATGCCCTGG GCAAAGAGCC TGCGGCGGAC AAAGCGGCAT TGCAGATGCA GCTCGATGCC TTTGTGGAGC ACTACAACCA GCAGCGCCCG CATGAGGCCT TGCAGCAAAG CATGCCGGCC CAGCATTACA GCGACTCGAC CAGGCCATAC CCCTCAAAGC TACCCGAGCT GCAGTACCCG AAGCATTGGG AACGAGTTCG AGTCAGCCAC AACGGCCTGA TTTACTGGCG AGCGCTGCGG GTCTACATCG GCTACCTGCT GGCGGGGCAG TGGATCGGGA TGCAGGAGGT GGCCGCTGGC CAGTGGGATG TGTATCTGGG GCCGGTGCGA CTGGGCTGCT TCAACGAAGA GGATGTGCGA GGACCCCAGA AGGACTATGT GAGCTTGAAG TGTTACCCAT GTCTGTGA
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Protein sequence | MPWKECAPMD EKLLFIADHL RGGAPLSELC RRYGISRKTA YKWVERYRQL GMDGLQERSR RPHGNNQAIS YAQRRAIIEL RTQQRSQMGP KKLHALLLQR WGPQETPSKT TIYNVLKAEG LVCSRRVRRR SVPTAQPLRT SKQPNGVWSA DYKGQFKTAD GHWCYPLTIM DHASRYLLAV HVYDSPNYED AKRSFEQVFR QYGLPERIRS DNGPPFATTG VAGLSRLAIW WIRLGIRPER IERGKPQQNG RHERMHRTLK HALGKEPAAD KAALQMQLDA FVEHYNQQRP HEALQQSMPA QHYSDSTRPY PSKLPELQYP KHWERVRVSH NGLIYWRALR VYIGYLLAGQ WIGMQEVAAG QWDVYLGPVR LGCFNEEDVR GPQKDYVSLK CYPCL
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