Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0876 |
Symbol | |
ID | 5746430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 982794 |
End bp | 983468 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641295956 |
Product | two component transcriptional regulator |
Protein accession | YP_001561907 |
Protein GI | 160896325 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.478428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATTC TGATTGCCGA AGACGACCAG GTCCTGGCCG ATGGTCTGCT GCGCAGCCTG CGCGGCTCGG GCGCCGTGGT CAGTCATGTG GCCAACGGCA GCGAGGCCGA TACCGCGCTG ATGACCAGCA GCGAGTTCGA CCTGCTCATC CTGGACCTGG GCCTGCCCAA GATGCACGGG CTCGAAGTGC TCAAGAAGCT GCGCGGCCGG GGCGATGCGC TGCCGGTGCT CATCCTCACG GCGGCCGACA GCGTGGAAGA GCGCGTGCAG GGGCTGGACT ACGGCGCCGA CGACTACATG GCCAAGCCGT TTGCGCTGTC CGAGCTGGAG GCGCGTGTGC GCGCGCTCAC GCGGCGCGGC ATGGGTGGCG CCAGCAGCAC CATCAAGCAC GGCCCCCTGG TCTACGACCA GGCCGGCCGC GTGGCCACCA TCGACGGCAA GATGGTCGAG CTGTCGGCGC GCGAGCTGGG CCTGCTGGAA GTGCTGCTGC AGCGTGCGGG CCGGCTGGTC AGCAAGGACC AGTTGGTCGA GCGCCTGTGC GAATGGGGCG ACGAGGTCAG CAACAATGCC ATCGAGGTCT ATATCCACCG CCTGCGCAAG AAGATAGAGC GCGGCCCCAT CCGCATCGCC ACCGTGCGCG GCCTGGGCTA CTGCCTTGAG AAGATCGCTT CCTGA
|
Protein sequence | MRILIAEDDQ VLADGLLRSL RGSGAVVSHV ANGSEADTAL MTSSEFDLLI LDLGLPKMHG LEVLKKLRGR GDALPVLILT AADSVEERVQ GLDYGADDYM AKPFALSELE ARVRALTRRG MGGASSTIKH GPLVYDQAGR VATIDGKMVE LSARELGLLE VLLQRAGRLV SKDQLVERLC EWGDEVSNNA IEVYIHRLRK KIERGPIRIA TVRGLGYCLE KIAS
|
| |