Gene Daci_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0875 
Symbol 
ID5746429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp982194 
End bp982694 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content70% 
IMG OID641295955 
ProductMarR family transcriptional regulator 
Protein accessionYP_001561906 
Protein GI160896324 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.445474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT TTTCCCCCGT CACGCCGCCC GCCGATGCCT GGCGCCAGAC CCACCTGGGC 
CGCCTGCTCG GCCATGCCAT GCGGCGGTTC GACGCGCGTG TGCTGCAGCT CATGGCGCGC
GATGTGGAGG TGCCGCTGGC GCTGTCCAAT CTTGCGGCGC GCGACAAGGT GGGTGCGGCC
CACATCCACA TCACGCGGCA TCTGTCGCTG GCTGGCGACA GGCTCACCGA CCTGGCCGAG
CGCGCTGGCA TGACCAAGCA GTCCATGGGC GACCTGGTGG CCCAGTGCGA GGCCTGGGGC
CTGGTCACGC GCGAAAGCGA CGAGCGCGAT GCGCGCGCAC GCCGAATCCG CTTCACGCCT
GCGGGCCTGG CTTGGCTGCA AGCTTTCCAT GACGCCGTGT CCCAGGCCGA GGCCGAGTTC
CGCGAGGAAG TCGGCGACGA CATCGCCACC GTGGTGGCGC TGGGGCTGGA GGCCTATGCG
GGCGGCGGCT CACTCGGGTA A
 
Protein sequence
MSEFSPVTPP ADAWRQTHLG RLLGHAMRRF DARVLQLMAR DVEVPLALSN LAARDKVGAA 
HIHITRHLSL AGDRLTDLAE RAGMTKQSMG DLVAQCEAWG LVTRESDERD ARARRIRFTP
AGLAWLQAFH DAVSQAEAEF REEVGDDIAT VVALGLEAYA GGGSLG