Gene Daci_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0873 
Symbol 
ID5746427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp980264 
End bp980740 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID641295953 
Productregulatory protein RecX 
Protein accessionYP_001561904 
Protein GI160896322 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.473072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCG CCAAGCTGTC GCTCAAGGGC CGGGCGCTCA AGCTGCTGGG CCAGCGCGAA 
CATTCACGGC TGGAGCTGGA ACGCAAGCTC GCCCCCCATG TGGAGGAAGG CGAAGACCTG
GGCGCCATGC TCGACGCGCT GGAGCAGCGC GGCTTCATCA GTGCCCAGCG CGTGGCCGAG
TCCGTGCTGC ACCAAAAGGC CGCACGCTTT GGCACGGCAC GCGTGGTGCA GGAGTTGCGC
AACAAGGGAC TGGACGACGG CCTGGTGCGC GCCGCCGCAG AGCAACTGCG TGCCACCGAA
CTGCAGCGCG CCCTTGCCGT ATGGCGCCAG CGCTTCGGCT CACCACCGAC CACACCGCAG
GAACGACTCA AGCAGATGCG CTTTCTGGCT GCGCGCGGTT TTGGTGGAGA AATTGCGAGC
AAGGTGCTGC GGGGGCGCAG CGAAGACTGG GACGCAGGAG CAGAGGACGA AGGCTAG
 
Protein sequence
MGFAKLSLKG RALKLLGQRE HSRLELERKL APHVEEGEDL GAMLDALEQR GFISAQRVAE 
SVLHQKAARF GTARVVQELR NKGLDDGLVR AAAEQLRATE LQRALAVWRQ RFGSPPTTPQ
ERLKQMRFLA ARGFGGEIAS KVLRGRSEDW DAGAEDEG