Gene Daci_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0868 
Symbol 
ID5746422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp973998 
End bp974891 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID641295948 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_001561899 
Protein GI160896317 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCT ACATCAACAA AGACACCAAG GTCATCACCC AAGGCATCAC GGGCAAGACG 
GGCCAGTTCC ACACTGAAAA GTGCATTGAA TACGCGAACG GCAAGAACTG CTTCGTGGCC
GGTGTGAACC CCAAGAAGGC CGGCGAAAAG ATCTTCGACG TGCCAATCTA CGCCTCCGTC
AAGGAAGCCG CGCAAGGCAC GGGCGCCACG GTCTCCGTGA TCTACGTTCC CCCCGCAGGC
GCTGCCGCCG CGATCTGGGA AGCCGTGGAA GCCGACCTGG ACCTGGCCAT CTGCATCACC
GAAGGCATCC CCGTCCGTGA CATGCTGGAA GTGCGCAACA AGATGCGCGC CAAGGAAGCC
GCAGGCGGCA AGCGCACCCT GCTGCTGGGC CCCAACTGCC CCGGTCTGAT CACGCCCGAC
GAGATCAAGA TCGGCATCAT GCCCGGCCAC ATCCACAAGA AGGGCCGCAT CGGCGTGGTC
AGCCGCTCCG GCACGCTGAC CTATGAAGCC GTGGCACAGC TGACCGAACT GGGCATTGGC
CAGTCGTCGG CCGTGGGCAT CGGCGGTGAC CCGATCAACG GTCTCAAGCA CATCGACGTG
ATGAAGGCCT TCAACGACGA TCCCGACACC GACGCCGTCA TCATGATCGG CGAAATCGGC
GGTCCCGACG AAGCCGAAGC TGCCCGCTGG TGCAAGGACA ACATGAAGAA GCCGATCGTC
GGCTTCATCG CTGGTGTCAC CGCCCCTCCC GGCAAGCGCA TGGGCCACGC CGGCGCGCTG
ATCTCCGGCG GTGCCGACAC GGCCGACGCC AAGCTGGCCA TCATGGAAGA GTGCGGTTTC
GTCATCACCC GCAATCCTTC CGAAATGGGT CGCCTGCTCA AGGGCCTGAT CTAA
 
Protein sequence
MSIYINKDTK VITQGITGKT GQFHTEKCIE YANGKNCFVA GVNPKKAGEK IFDVPIYASV 
KEAAQGTGAT VSVIYVPPAG AAAAIWEAVE ADLDLAICIT EGIPVRDMLE VRNKMRAKEA
AGGKRTLLLG PNCPGLITPD EIKIGIMPGH IHKKGRIGVV SRSGTLTYEA VAQLTELGIG
QSSAVGIGGD PINGLKHIDV MKAFNDDPDT DAVIMIGEIG GPDEAEAARW CKDNMKKPIV
GFIAGVTAPP GKRMGHAGAL ISGGADTADA KLAIMEECGF VITRNPSEMG RLLKGLI