Gene Daci_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0865 
Symbol 
ID5746419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp971104 
End bp971817 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID641295945 
ProductFHA domain-containing protein 
Protein accessionYP_001561896 
Protein GI160896314 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.646672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC TGGTCATCTC CATCGACGGC GCCGTCATCA AGGAAGTGCA GCTGGCCAAG 
GAGCGCACCA CGCTGGGACG CCGCCCCTAC AACGACATCG TGATCGACAA CCTCGCCGTC
AGCGGCGAGC ACGCCGTTCT CAGCATCGTC GACGGCACCG TCATCATCGA AGACCTGCGC
AGCACCAACG GCACCTATGT CAACGGCCAG CCCATACTGC GCCAGACCCT GAACCACGGC
GACCTGCTGG ACATCGGCAA GTACAAGATC CGCTTCGTGC AACAGCAGGT CAGCGCGTCC
TCACGCTCGG CCCTGGCCGC CATTGCCGCC GCAGTCGAGG CCACCCGCCC AGCCCCTTTG
GCAGAAGCGG ATCTGCCCTC GCAGTTCAGC CAGGAAACGC CCTCGGGTTT CGACCACACC
CTGCCCCCTT CCATGGCCGG ACTGGCCACG CGCCAGGCCG CCATCCGCAT GCTCAACGGC
AACGCCGCCG GCCGCGAAGT ACCACTGGTC AAAGTCGTCA CCACGCTGGG CAAGCCCGGC
GTGGCCGTCG CCTCCATCAC CCAGAAGCAC CACGGCTTCG TGCTGGCCCA GCTGGAAGGC
GACTCCCCCA GCCTCAAGCT CAACGGCCAG GAAATCGGCC GCCGCGCCAT GCCGCTGCAG
CATGGCGACA CGGTGGAACT GGCAGGTACG CAGATGCAGT TCCTGGTGGC GTGA
 
Protein sequence
MPTLVISIDG AVIKEVQLAK ERTTLGRRPY NDIVIDNLAV SGEHAVLSIV DGTVIIEDLR 
STNGTYVNGQ PILRQTLNHG DLLDIGKYKI RFVQQQVSAS SRSALAAIAA AVEATRPAPL
AEADLPSQFS QETPSGFDHT LPPSMAGLAT RQAAIRMLNG NAAGREVPLV KVVTTLGKPG
VAVASITQKH HGFVLAQLEG DSPSLKLNGQ EIGRRAMPLQ HGDTVELAGT QMQFLVA