| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0854 |
|---|
| Symbol | |
|---|
| ID | 5746408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 961131 |
|---|
| End bp | 961691 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641295934 |
|---|
| Product | YaeQ family protein |
|---|
| Protein accession | YP_001561885 |
|---|
| Protein GI | 160896303 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.158201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCA AATCCACCAT CTTCAAGGCG AACCTGTCCA TCGCCGACAT TGACCACGGC
TACTACGCCG ACCATGCGCT GACCCTGGCG CGCCATCCCA GCGAGACGGA CGAACGCATG
ATGGTGCGCC TGGTGGCCCT GGCCCTCAAT GCACACCAGC TCAATGACAT GTGCAAGGGC
GACGGCACGC TGGCGTTTGG CGCAGGCCTG TCCGATCCCG AAGACCCCGA TGTCTCGCTG
ACCGACTTCA CGGGCGCCAA GCGCCTGTGG ATCGAGGTCG GCCAGCCCGA GGAAAAGCCC
ATCGCCAAGG CCTGCAACAA GTCCGATGCG GTGGTGCTCT ACGCCTTCCA CCATGCGGCC
GAGGTCTGGT GGAAGGGCCT GGAGGGCAAG CTGGCGCGGC TGAACAAGCT GCAGGTCTGG
CGCATTCCCT CCGAAACATC CCAATCCCTG GCGGAGCTGG CCGAGCGCAG CATGCAGCTG
CAGGCCACCA TCCAGGAAGG CGCGCTGACG CTCAGCAGCA ACCTGGGCAC GGTCTTCATC
GAGCCGCTGC GCTGGAAGTA A
|
|---|
| Protein sequence | MALKSTIFKA NLSIADIDHG YYADHALTLA RHPSETDERM MVRLVALALN AHQLNDMCKG
DGTLAFGAGL SDPEDPDVSL TDFTGAKRLW IEVGQPEEKP IAKACNKSDA VVLYAFHHAA
EVWWKGLEGK LARLNKLQVW RIPSETSQSL AELAERSMQL QATIQEGALT LSSNLGTVFI
EPLRWK
|
|---|
| |