Gene Daci_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0850 
Symbol 
ID5746404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp954767 
End bp957532 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content69% 
IMG OID641295930 
Product(glutamate--ammonia-ligase) adenylyltransferase 
Protein accessionYP_001561881 
Protein GI160896299 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.891075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCT CAGAGCACGC AATGGCAGAC ACGGCCTTGA ATGTCCCCGC ACAGGCCGCC 
TATTCCCGTT TCCACCAACG GCTGCATCGT CGCTATGGCG ACGAGTTGAG CCTGTTGCCG
CCGGGCCCGC CCGAGCGTGC CTCCATGGAG CAGGCCCTGT CGGCGCTGCT GGAGCGCGGG
CTGGACCTGT CGGCCGCGCT GCGCGTGCTG CGCCAGCTGG TCATGGAGCG CACCATGGTG
CTCGACTGCG AGCAGCAGGC GCCGCTGGCC GTGGTCACGC GGGCCGTGAC CGAGCTGGCC
GAGCTGGCGC TGGAGCGCGC CTGCATCCAG GTGCGCGCCG AACTCGATGC GCGCCATGGC
GCACCGCAAG GCCCCGAGGG CCGGCCCGTG CAGCTGTGGA TCATCGGCAT GGGCAAGCTG
GGCGCGCGCG AGCTCAATGT CTCCAGCGAC ATCGACCTGA TCTACGTCTA CGAGCAGGAC
GGCGACACGG CCGGCCTGCC TGACGGGCGC GGCGTTCTCT CCAACCATGA GTACTTCGCG
CGCGTTGTCA AAGGCATCTA TGGCCTGATC GGCGACACCA CCGAGCACGG ATTCGTGTTC
CGCGTGGACC TGGCGCTGCG GCCCAACGGC AACTCGGGGC CGTCGGCTGT CTCGCTGGCC
TCGCTGGAAG AGTATCTGCA GACCCATGGC CGCGAATGGG AGCGCTTCGC CTGGCTCAAG
AGCCGGGTGG TGGCGCCCAT GGACAGCGTG CGCTCCACGC AGGTGCAGGC GCTGCGCGCC
GTGGTCCTGC CCTTCGTCTT TCGCCGCTAT CTGGATTACG CGGTCTTCGA TGCGCTGCGT
TCGCTGCACC GCCAGATCCG CGAGCATGCG GCGCGGCGCA GCGCGGGCCA TCCCGGCCGC
TCCAATGACG TCAAGCTCTC GCGCGGCGGT ATCCGCGAGA TCGAATTCAC CGTGCAATTG
CTGCAGGTGG TGCGTGGCGG CCAGTTCCCC GAGCTGCGCT GCCGCCCCAC GCTGGAGGCG
CTGGGGCGCC TGGCGCGCGC CGGCCTCATG AGCCAGGAAG TGGCCGACGC CCTGGGCGCG
GCCTATACCT TTTTGCGCCG TGTCGAGCAC CGCATCCAGT ACCTGGACGA CCAGCAGACC
CATGTGCTGC CCACGCGCGA TGACGACCTC GAATGGATTG CGCGCACCAT GGGCTTTGCC
GATACCTGCG CCTTCCTGCA CCAGTTCGAC GCCCACCGCG AAAAGGTGGC CGAGGAGTTC
GACACCCTGC TCGGCGGCTC GGCCCCGCCG CAATGCAGCG CGGGCCGCTG CAACGGCGCC
CGCAGCCCTG CCCAGGGAGG AACGCCGCGC GAGATCGATG GACTCATGGA GCAGTTGCCG
CCCGCCCTGG CCGCCCACGT GGCCGACTGG CGCGGCAACG CCCGCATCGC CAACCTGCGC
GACGAGGCGC GCGGCCGGCT GTTCCGCCTT GTGCAGCGCA CGGCGCAATG GGTGGCCGAG
CGCAGCGTGC CCGAAGACGC CGCAGTGCGC TTTCTGAACT GGCTGGAGCC GCTGCTGCGC
CGCGAAAGCT ATCTGGCCCT GCTGCTGGAG CGCCCTGCCG TGCACGAGCG GCTGCTGGAC
CTGCTGGGCG CGGCGCGCTG GCCCGCGCGC TATCTGCAGC AGCACCCGGG CGTGATCGAC
GAGCTTGCCA ACGACGCCAT GCTGGGCGAG CGCTTCTCCC CCATGGATTT CGAGCATGAG
CTGGCCCTGC GCCTGGCCGC GCTGCAGACC ACGGGCGAGG ACGACGACGA AACCCTGCTG
AACCTGCTGC GACGCGCCCA CCATGCCGAG GTCTTTCGCA CGCTGGCGCG TGATATCGAG
GGCCGCATCA CGGTCGAGCA GGTGGCGGAC GACCTCAGTG CGCTGGCCGA CTGCGTGCTG
CGCGTGACGG CCAGCTGGTG CTGGAGCCGG CTCAAGAACC GCCACCGCGA GTCGCCGCAA
TTCGCCATCA TTGGCTACGG CAAGCTCGGC GGAAAGGAGC TGGGCTACGG CAGCGACCTG
GACATCGTCT TCGTCTTCGA TGACGACGAC GAGCACGCCT CCGAGATCTA TGCCGCCTTT
GTGCGCAAGC TCATCAACTG GCTGGCCGTC AAGACGGGCG AGGGCGATCT GTTCGAGATC
GACACTGCGC TGCGCCCCAA CGGCAACTCC GGCCTGCTGG TGACCAGCTT TGCCTCCTAT
GCCAACTACC AGCAGCAGCG CGGCAGCAAC ACGGCATGGA CCTGGGAGCA CCAGGCCATG
ACGCGGGCGC GCTTCGTGCT GGGCAGCGAC GATCTGCAGG CCCGCTTCGA CGCCGTGCGC
GAGGCCGTGA TCACCGCGCC GCGCGACGCC GCGGCCCTGC GCGACGAGAT CGTGGCCATG
CGCGAACGCG TGCGCAGTGC GCATCCGGTG CGCGGCGGCC TCTTCGACGT CAAGCACAGC
CCCGGCGGCA TGGTCGATGT GGAGTTCGCC GTCCAGTACC TGGTTCTCTC GCAATCGGCC
ATGCATCCGG GGCTGATGGC CAATCTGGGC AACATCGCGC TGCTGCAGCG TGCGGAAGAG
GCGGGCCTGC TGCCTGCAGG CGTGGGCCAG CAGGCCGCCC GGGCCTACCG TGAACTGCGC
CGCCTGCAGC ACGTGGCGCG GCTGGACGAG CGGACGGCCC AATTGGTGCC CGGCCAGGCC
GAGCCGCTCA GTGCGCCGGT CAAGGCCCTG TGGGAAGCTG TTTTCACGGG AGCCGCTCTG
GTGTGA
 
Protein sequence
MQSSEHAMAD TALNVPAQAA YSRFHQRLHR RYGDELSLLP PGPPERASME QALSALLERG 
LDLSAALRVL RQLVMERTMV LDCEQQAPLA VVTRAVTELA ELALERACIQ VRAELDARHG
APQGPEGRPV QLWIIGMGKL GARELNVSSD IDLIYVYEQD GDTAGLPDGR GVLSNHEYFA
RVVKGIYGLI GDTTEHGFVF RVDLALRPNG NSGPSAVSLA SLEEYLQTHG REWERFAWLK
SRVVAPMDSV RSTQVQALRA VVLPFVFRRY LDYAVFDALR SLHRQIREHA ARRSAGHPGR
SNDVKLSRGG IREIEFTVQL LQVVRGGQFP ELRCRPTLEA LGRLARAGLM SQEVADALGA
AYTFLRRVEH RIQYLDDQQT HVLPTRDDDL EWIARTMGFA DTCAFLHQFD AHREKVAEEF
DTLLGGSAPP QCSAGRCNGA RSPAQGGTPR EIDGLMEQLP PALAAHVADW RGNARIANLR
DEARGRLFRL VQRTAQWVAE RSVPEDAAVR FLNWLEPLLR RESYLALLLE RPAVHERLLD
LLGAARWPAR YLQQHPGVID ELANDAMLGE RFSPMDFEHE LALRLAALQT TGEDDDETLL
NLLRRAHHAE VFRTLARDIE GRITVEQVAD DLSALADCVL RVTASWCWSR LKNRHRESPQ
FAIIGYGKLG GKELGYGSDL DIVFVFDDDD EHASEIYAAF VRKLINWLAV KTGEGDLFEI
DTALRPNGNS GLLVTSFASY ANYQQQRGSN TAWTWEHQAM TRARFVLGSD DLQARFDAVR
EAVITAPRDA AALRDEIVAM RERVRSAHPV RGGLFDVKHS PGGMVDVEFA VQYLVLSQSA
MHPGLMANLG NIALLQRAEE AGLLPAGVGQ QAARAYRELR RLQHVARLDE RTAQLVPGQA
EPLSAPVKAL WEAVFTGAAL V