Gene Daci_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0843 
Symbol 
ID5746397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp943344 
End bp944594 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content69% 
IMG OID641295923 
ProductMltA domain-containing protein 
Protein accessionYP_001561874 
Protein GI160896292 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCACC ACACAATAGC GACCAGAATC ACCAAGGCCA GCAGTGCTTC GAGCAAAATC 
AACCCCATGA ATTTCCACCT CCTGCGCCAT GCCGCGATGG CGCTGATTGT AGGGACGCTG
GTCGCCTGCA CGACCACCAC CAAGCCGGTC TATGACCCTT CGCCCGTGCC CGACCTGCAG
CCGGGAGGCC CGGTCACCGT GACACCCAGG CCCCCGCTGG TCACCAGCAC CCCCACCAAG
AGCCGCTGGA TCGCAGCCGA CTGGAGCGAA TTGCCCGGCC TGCAGGAAGA CGCGCTGCAC
GAAGCCTGGA ATGCCTGGCT CAAGAACTGC GAACGGCCCA GCTCGGTCTT CGCGGGCCTG
TGCCGGGACG TGCGCCAGCT GAGCATTGCC ACGGGCGACG AGCAGCGCGC CTGGCTCATG
GCCAATCTGC AGCCCTACCG CATCGAAGCG CTGGGCGGTG GCCCGGACGG CATGCTGACC
GCCTACTACG AGCCCCTGTT CGAGGCGCGG CGCCTGCCGG GCGACGGCTT CAACGTGCCG
CTGTACAAGA CGCCGGCCGG CGCCGGCTTC GGCAGCCGCA AGCCCTGGTT CTCGCGCCAG
CAGATCGAGA CGATGCCCGA GGCCCAGGCG GCCCTGGCAG GCCGCGCCAT CGCCTGGCTG
CGCGACCCCG TCGATGCGAT GGTGCTGCAC ATCCAGGGAT CGGGGCGCCT GAACATCACC
GAGCCCACAG GCGCGCAACG CACGATCCGC GTCGCCTTTG CGGGCACCAA TGACCAGCCC
TACAAGAGCG TGGGCCGCTG GCTGCTGGAC CAGGGACTGG TGCGCGATGC CACCTGGCCG
GGCATCAGCG CCTGGGTGGC CGCCAACCCC GGCCGCGTCA ATGAAATGCT GTGGAGCAAC
CCGCGCTATG TCTTCTTCCG CGAGGAGCCG CTGGAAGGCC TGGACCTGCA ATTCGGCCCC
AAGGGCGCCC AGGGCGTGGC CCTGACCCCG GGCCGCTCCA TCGCCGTGGA CAAGCAGAGC
ATTCCCTACG GCACGCCGGT CTGGCTGTCC ACATCCGGGC CCACCGTGGC CCTGAACCGC
CTGGTCTTTG CCCAGGACAC GGGCAGCGCC ATCGTCGGCG CCGTGCGTGC CGACTACTTC
ATGGGCTGGG GACCCGAAGC CGGCGACCTG GCCGGCCGCA TCAAGCAGAA CCTGCGCCTG
TGGGCCTTCT GGCCGCGCAG CCTTGCCAGC CAGGCGCCGC ACTTGAGGTG A
 
Protein sequence
MVHHTIATRI TKASSASSKI NPMNFHLLRH AAMALIVGTL VACTTTTKPV YDPSPVPDLQ 
PGGPVTVTPR PPLVTSTPTK SRWIAADWSE LPGLQEDALH EAWNAWLKNC ERPSSVFAGL
CRDVRQLSIA TGDEQRAWLM ANLQPYRIEA LGGGPDGMLT AYYEPLFEAR RLPGDGFNVP
LYKTPAGAGF GSRKPWFSRQ QIETMPEAQA ALAGRAIAWL RDPVDAMVLH IQGSGRLNIT
EPTGAQRTIR VAFAGTNDQP YKSVGRWLLD QGLVRDATWP GISAWVAANP GRVNEMLWSN
PRYVFFREEP LEGLDLQFGP KGAQGVALTP GRSIAVDKQS IPYGTPVWLS TSGPTVALNR
LVFAQDTGSA IVGAVRADYF MGWGPEAGDL AGRIKQNLRL WAFWPRSLAS QAPHLR